Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03002 ATGACTGATCCGGTAATCATTTCTCATGGAGATGGTAAACAAAGTAATGATGATGATTCAGGTGTTTTCTCGTCTGAACACCGTCGCAAGATAATTATAGTATCAAATTCTCTTCCTCTCAATGCGAAAAGGGACAAAGTATCTGGCAGATGGTGCTTCAGTTATGATGAGGATTCAATTTTTTGGCAGTTAAAGGATGGTCTCTCTCCTGATGCTGATGTTGTGTATGTGGGATCTCTGAAGGTTGATGTTGATGCAAGTGAGCAAGATAAAGTTTCCCTTCAGTTGCTGGAGGAATTCAACTGCTTGCCTACTTTTATTCCTCCAGAACTCTACAAACAATTCCATGATGGATTCTGCAAGCAACATTTGTGGCCTCTATTCCATTACATGTTGCCCATGTATCCAGGCAATCGCCGCTTTGATAGATCACAGTGGCAGGCTTATGTTTCTGCTAACAAGATATTTGCAGATAAAGTGATGGAGGTCCTTAATCCAGAAGATGATTATGTATGGGTTCATGATTATCATCTTATGGTCCTTCCGACTTTTCTGCGTAAGCGTTGTAGTCGAGTCAAGCTTGGTTTTTTCCTCCACAGTCCATTTCCTTCATCAGAAATTTATAAAACTCTGCCTGTCAGAGGTGAAATTTTGAAAGCACTGCTTAATGCAGATTTAGTTGGTTTTCACACCTTTGATTATGCTCGCCATTTTCTCTCCTGCTGCAGGCGAATGCTAGGCTTGGAACATGAATCCAAAAGGGGTTACATTGGGCTTGAATACTCTGGACGGACAATATTCATTAAAATTTTGCCTGCTGGGATTCACATGGGCCGACTTCAATCTGCCTTAGATCACCCTTCCTCTTCAAACAAAGTCAGAGAAATCCACGAACAATTTAAGGGCAAAAAGATTATTCTTGGTGTTGATGATATGGACATATTCAAAGGTGTCAGTTTAAAATTCATGGCCATAGAACAACTCCTGCAGCAATATCCGGAAATGCAAGGTGAAATAGTACTGATCCAAATTTTAAACCCCCCAAGTAGTGCTGACAAAGACGTTGACAATGCAAAGGAGGAGGCTTACATTACTTCCAAAAGGATAAATGACAGGTTTGGTTTAGAAAGTTATGAACCTATCATCATCATTGACCGCCATGTGCCTTTCTATGAGAAGGCAGCCTATTATGCTTTGGCAGAATGTTGCATTGTGAATGCAGTTCGTGACGGTTTAAATTTGGTTCCATACAAGTACACTGTTTGTAGGCAGGGAAGTGCTAAAATGGATGAAGCCTTAGAAATTGCTTCTGACTCCCCCCGTATAAGTGCACTTGTTGTTTCTGAGTTTATAGGCTGCACACCATCTCTTAGTGGGGCAATAAGGGTGAACCCATGGGATATTGATGCAGTAGCCGAAGCACTAAATTTGGCAATCACAATGCCTGATGGAGAGAAGCAGCTTCGACATGAGAAGCACTACAGATATGTTAGTTCTCATGATGTGGCCTACTGGGCTAGAAGCTTTGAGCAAGATTTAGTGTTTTCGTGCAAGGATCACCATAGGAACTGTTGCTGGGGCATTGGCTTTGGTCTGAACTTCAGAATTTTGTCCCTTTCTCCTAGTTTCAGGAGGCTATCCATAGACCAAATTGTCCCAGCATATAAAAGGAGCAGTTGCAGAGCAATCTTTTTGGATTATGATGGTACAGTTGTACCTCAAGCATCCATTGTGAAAGCCCCCAGTCCTGAAGTCATATCTGTGCTAAATAATCTTTGCAGTGATGTTAACAACACTGTGTTTATTGTTAGTGGCAGGGGAAAAAGTTCATTGAGTGAATGGTTTGATCAGTGTGAGGATCTTGGTATAGCAGCTGAGCATGGTTATTTTATAAGGTGGGGTAAGCATGCTAGTTGGGAAATGAGTCATGCAGATACGGATTTTGCATGGAAAAGGATTGCTGAACCTGTGATGAGATCTTATATGGAGGCCACAGACGGCTCCTCTGTAGAGAGCAAAGAGAGTGCCTTGGTATGGCATTACTGTGATGCAGATCCTGATTTTGGATCTTGGCAAGCCATGGAGCTGATGGATCACCTTGAAAATGTACTTGCGAATGAGCCTGTTGTTGTGAAAAAAGGACAACATATTATCGAAGTCAAGCCTCAGGGCATTACAAAAGGGTTAGTTGCACAGGAAGTTCTTTCTACCCTAACCAAGAAGGGTAAATTGCCAGATTTTGTACTGTGCATTGGTGATGATAGGTCTGATGAGGATATGTTTGAGAGCATTTTAACCAAACCTTACAGTGCTACCTCCTTCTCAGCACCCGAAATCTTTGCATGCACTGTTGGACAAAAACCAAGCAAGGCTAGATACTACCTAGATGACACCATGGATGTGATGTCATTACTTGAGGGTCTTGGTGCTGCTTCAGTGCCTAAATCAAGATATTCTACAGAAACCCCTTTGGAGAAAGGAGAAGTATGTTTTGAGAATATCCTATAA 2508 0.4179 MTDPVIISHGDGKQSNDDDSGVFSSEHRRKIIIVSNSLPLNAKRDKVSGRWCFSYDEDSIFWQLKDGLSPDADVVYVGSLKVDVDASEQDKVSLQLLEEFNCLPTFIPPELYKQFHDGFCKQHLWPLFHYMLPMYPGNRRFDRSQWQAYVSANKIFADKVMEVLNPEDDYVWVHDYHLMVLPTFLRKRCSRVKLGFFLHSPFPSSEIYKTLPVRGEILKALLNADLVGFHTFDYARHFLSCCRRMLGLEHESKRGYIGLEYSGRTIFIKILPAGIHMGRLQSALDHPSSSNKVREIHEQFKGKKIILGVDDMDIFKGVSLKFMAIEQLLQQYPEMQGEIVLIQILNPPSSADKDVDNAKEEAYITSKRINDRFGLESYEPIIIIDRHVPFYEKAAYYALAECCIVNAVRDGLNLVPYKYTVCRQGSAKMDEALEIASDSPRISALVVSEFIGCTPSLSGAIRVNPWDIDAVAEALNLAITMPDGEKQLRHEKHYRYVSSHDVAYWARSFEQDLVFSCKDHHRNCCWGIGFGLNFRILSLSPSFRRLSIDQIVPAYKRSSCRAIFLDYDGTVVPQASIVKAPSPEVISVLNNLCSDVNNTVFIVSGRGKSSLSEWFDQCEDLGIAAEHGYFIRWGKHASWEMSHADTDFAWKRIAEPVMRSYMEATDGSSVESKESALVWHYCDADPDFGSWQAMELMDHLENVLANEPVVVKKGQHIIEVKPQGITKGLVAQEVLSTLTKKGKLPDFVLCIGDDRSDEDMFESILTKPYSATSFSAPEIFACTVGQKPSKARYYLDDTMDVMSLLEGLGAASVPKSRYSTETPLEKGEVCFENIL* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03002 835 Pfam Glycosyltransferase family 20 30 513 IPR001830 GO:0003824|GO:0005992
Phac9g03002 835 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 560 677 - -
Phac9g03002 835 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 30 513 - -
Phac9g03002 835 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 23 281 - -
Phac9g03002 835 Gene3D Glycogen Phosphorylase B; 22 281 - -
Phac9g03002 835 NCBIfam HAD-IIB family hydrolase 562 763 IPR006379 -
Phac9g03002 835 CDD GT20_TPS 30 513 IPR001830 GO:0003824|GO:0005992
Phac9g03002 835 FunFam Trehalose-6-phosphate synthase 2 644 723 - -
Phac9g03002 835 CDD HAD_TPP 562 802 - -
Phac9g03002 835 Gene3D Glycogen Phosphorylase B; 282 498 - -
Phac9g03002 835 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 20 810 IPR001830 GO:0003824|GO:0005992
Phac9g03002 835 FunFam Alpha,alpha-trehalose-phosphate synthase 283 498 - -
Phac9g03002 835 NCBIfam trehalose-phosphatase 561 807 IPR003337 GO:0003824|GO:0005992
Phac9g03002 835 MobiDBLite consensus disorder prediction 1 23 - -
Phac9g03002 835 SUPERFAMILY HAD-like 561 808 IPR036412 -
Phac9g03002 835 Pfam Trehalose-phosphatase 564 798 IPR003337 GO:0003824|GO:0005992
Phac9g03002 835 FunFam Trehalose-6-phosphate synthase 10 691 819 - -
Phac9g03002 835 Gene3D - 691 821 IPR023214 -
Phac9g03002 835 Gene3D - 560 672 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03002 Phac-Chr9 29250379 29256342 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03002 1 835 Trehalose Biosynthesis Gene Families AT1G23870 64.994 0.0 1167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03002 K16055 - gmx:100812031 1590.47