Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03001 ATGCTGAATTTCTCTCGAACTCCCAGATCTCTTCCGCGAGTTATGACTGATCCGGTAATCATTTCTCATGGAGATGGTAAACAAAGTAATGATGATGATTCAGGTGTTTTCTCGTCTGAACACCGTCGCAAGATAATTATAGTATCAAATTCTCTTCCTCTCAATGCGAAAAGGGACAAAGTATCTGGCAGATGGTGCTTCAGTTATGATGAGGATTCAATTTTTTGGCAGTTAAAGGATGGTCTCTCTCCTGATGCTGATGTTGTGTATGTGGGATCTCTGAAGGTTGATGTTGATGCAAGTGAGCAAGATAAAGTTTCCCTTCAGTTGCTGGAGGAATTCAACTGCTTGCCTACTTTTATTCCTCCAGAACTCTACAAACAATTCCATGATGGATTCTGCAAGCAACATTTGTGGCCTCTATTCCATTACATGTTGCCCATGTATCCAGGCAATCGCCGCTTTGATAGATCACAGTGGCAGGCTTATGTTTCTGCTAACAAGATATTTGCAGATAAAGTGATGGAGGTCCTTAATCCAGAAGATGATTATGTATGGGTTCATGATTATCATCTTATGGTCCTTCCGACTTTTCTGCGTAAGCGTTGTAGTCGAGTCAAGCTTGGTTTTTTCCTCCACAGTCCATTTCCTTCATCAGAAATTTATAAAACTCTGCCTGTCAGAGGTGAAATTTTGAAAGCACTGCTTAATGCAGATTTAGTTGGTTTTCACACCTTTGATTATGCTCGCCATTTTCTCTCCTGCTGCAGGCGAATGCTAGGCTTGGAACATGAATCCAAAAGGGGTTACATTGGGCTTGAATACTCTGGACGGACAATATTCATTAAAATTTTGCCTGCTGGGATTCACATGGGCCGACTTCAATCTGCCTTAGATCACCCTTCCTCTTCAAACAAAGTCAGAGAAATCCACGAACAATTTAAGGGCAAAAAGATTATTCTTGGTGTTGATGATATGGACATATTCAAAGGTGTCAGTTTAAAATTCATGGCCATAGAACAACTCCTGCAGCAATATCCGGAAATGCAAGGTGAAATAGTACTGATCCAAATTTTAAACCCCCCAAGTAGTGCTGACAAAGACGTTGACAATGCAAAGGAGGAGGCTTACATTACTTCCAAAAGGATAAATGACAGGTTTGGTTTAGAAAGTTATGAACCTATCATCATCATTGACCGCCATGTGCCTTTCTATGAGAAGGCAGCCTATTATGCTTTGGCAGAATGTTGCATTGTGAATGCAGTTCGTGACGGTTTAAATTTGGTTCCATACAAGTACACTGTTTGTAGGCAGGGAAGTGCTAAAATGGATGAAGCCTTAGAAATTGCTTCTGACTCCCCCCGTATAAGTGCACTTGTTGTTTCTGAGTTTATAGGCTGCACACCATCTCTTAGTGGGGCAATAAGGGTGAACCCATGGGATATTGATGCAGTAGCCGAAGCACTAAATTTGGCAATCACAATGCCTGATGGAGAGAAGCAGCTTCGACATGAGAAGCACTACAGATATGTTAGTTCTCATGATGTGGCCTACTGGGCTAGAAGCTTTGAGCAAGATTTAGTGTTTTCGTGCAAGGATCACCATAGGAACTGTTGCTGGGGCATTGGCTTTGGTCTGAACTTCAGAATTTTGTCCCTTTCTCCTAGTTTCAGGAGGCTATCCATAGACCAAATTGTCCCAGCATATAAAAGGAGCAGTTGCAGAGCAATCTTTTTGGATTATGATGGTACAGTTGTACCTCAAGCATCCATTGTGAAAGCCCCCAGTCCTGAAGTCATATCTGTGCTAAATAATCTTTGCAGTGATGTTAACAACACTGTGTTTATTGTTAGTGGCAGGGGAAAAAGTTCATTGAGTGAATGGTTTGATCAGTGTGAGGATCTTGGTATAGCAGCTGAGCATGGTTATTTTATAAGGTGGGGTAAGCATGCTAGTTGGGAAATGAGTCATGCAGATACGGATTTTGCATGGAAAAGGATTGCTGAACCTGTGATGAGATCTTATATGGAGGCCACAGACGGCTCCTCTGTAGAGAGCAAAGAGAGTGCCTTGGTATGGCATTACTGTGATGCAGATCCTGATTTTGGATCTTGGCAAGCCATGGAGCTGATGGATCACCTTGAAAATGTACTTGCGAATGAGCCTGTTGTTGTGAAAAAAGGACAACATATTATCGAAGTCAAGCCTCAGGGCATTACAAAAGGGTTAGTTGCACAGGAAGTTCTTTCTACCCTAACCAAGAAGGGTAAATTGCCAGATTTTGTACTGTGCATTGGTGATGATAGGTCTGATGAGGATATGTTTGAGAGCATTTTAACCAAACCTTACAGTGCTACCTCCTTCTCAGCACCCGAAATCTTTGCATGCACTGTTGGACAAAAACCAAGCAAGGCTAGATACTACCTAGATGACACCATGGATGTGATGTCATTACTTGAGGGTCTTGGTGCTGCTTCAGTGCCTAAATCAAGATATTCTACAGAAACCCCTTTGGAGAAAGGAGAAGTATGTTTTGAGAATATCCTATAA 2550 0.4188 MLNFSRTPRSLPRVMTDPVIISHGDGKQSNDDDSGVFSSEHRRKIIIVSNSLPLNAKRDKVSGRWCFSYDEDSIFWQLKDGLSPDADVVYVGSLKVDVDASEQDKVSLQLLEEFNCLPTFIPPELYKQFHDGFCKQHLWPLFHYMLPMYPGNRRFDRSQWQAYVSANKIFADKVMEVLNPEDDYVWVHDYHLMVLPTFLRKRCSRVKLGFFLHSPFPSSEIYKTLPVRGEILKALLNADLVGFHTFDYARHFLSCCRRMLGLEHESKRGYIGLEYSGRTIFIKILPAGIHMGRLQSALDHPSSSNKVREIHEQFKGKKIILGVDDMDIFKGVSLKFMAIEQLLQQYPEMQGEIVLIQILNPPSSADKDVDNAKEEAYITSKRINDRFGLESYEPIIIIDRHVPFYEKAAYYALAECCIVNAVRDGLNLVPYKYTVCRQGSAKMDEALEIASDSPRISALVVSEFIGCTPSLSGAIRVNPWDIDAVAEALNLAITMPDGEKQLRHEKHYRYVSSHDVAYWARSFEQDLVFSCKDHHRNCCWGIGFGLNFRILSLSPSFRRLSIDQIVPAYKRSSCRAIFLDYDGTVVPQASIVKAPSPEVISVLNNLCSDVNNTVFIVSGRGKSSLSEWFDQCEDLGIAAEHGYFIRWGKHASWEMSHADTDFAWKRIAEPVMRSYMEATDGSSVESKESALVWHYCDADPDFGSWQAMELMDHLENVLANEPVVVKKGQHIIEVKPQGITKGLVAQEVLSTLTKKGKLPDFVLCIGDDRSDEDMFESILTKPYSATSFSAPEIFACTVGQKPSKARYYLDDTMDVMSLLEGLGAASVPKSRYSTETPLEKGEVCFENIL* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03001 849 Gene3D - 574 686 IPR023214 -
Phac9g03001 849 Gene3D - 705 835 IPR023214 -
Phac9g03001 849 NCBIfam HAD-IIB family hydrolase 576 777 IPR006379 -
Phac9g03001 849 FunFam Trehalose-6-phosphate synthase 10 705 833 - -
Phac9g03001 849 SUPERFAMILY HAD-like 575 822 IPR036412 -
Phac9g03001 849 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 37 295 - -
Phac9g03001 849 Pfam Glycosyltransferase family 20 44 527 IPR001830 GO:0003824|GO:0005992
Phac9g03001 849 FunFam Alpha,alpha-trehalose-phosphate synthase 297 512 - -
Phac9g03001 849 MobiDBLite consensus disorder prediction 18 37 - -
Phac9g03001 849 NCBIfam trehalose-phosphatase 575 821 IPR003337 GO:0003824|GO:0005992
Phac9g03001 849 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 574 691 - -
Phac9g03001 849 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 44 527 - -
Phac9g03001 849 Gene3D Glycogen Phosphorylase B; 36 295 - -
Phac9g03001 849 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 13 824 IPR001830 GO:0003824|GO:0005992
Phac9g03001 849 Gene3D Glycogen Phosphorylase B; 296 512 - -
Phac9g03001 849 CDD GT20_TPS 44 527 IPR001830 GO:0003824|GO:0005992
Phac9g03001 849 Pfam Trehalose-phosphatase 578 812 IPR003337 GO:0003824|GO:0005992
Phac9g03001 849 CDD HAD_TPP 576 816 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03001 Phac-Chr9 29250379 29256342 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g03001 1 849 Trehalose Biosynthesis Gene Families AT1G23870 64.865 0.0 1184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03001 K16055 - gmx:100812031 1614.36