Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02988 ATGAGCAGCGATTTCTATCGACTCGCAGTTTCATCGCACTTCAGCAGTTTCCCCAAATCCTTCTCTCTGCGAAAGAAAGTGCCATGGTGGTACCAAATCCTAAACCCTCGATCAAAGTTCGTTGCCAAATGGAACCGCACCTTCCTCTACGTCTGCATTGCAGCGCTCTTCCTGGACCCTCTCTACTTCTATTTCCCCATCACCGGAGACAAGGCCTGCATGCAGACCGACCTCCCCCTTGGAGTCTTCGTCACCCTCTCGCGTACCGTCGCCGACCTCTTCTTCCTCTTCCACATGGTGCTCAAGTTCCGCACCGCCTACATTGCTCCCACCTCTCGCGTTTATGGCCGCAAAGAACTCGTCACAGACCCTCGTGATATCGCCTCACGTTACCTCAAATCTGATTTCATTATCGATCTCCTTGCAACCCTTCCTCTTCCTCAGATAGTGGTCTGGTTCGTGATTCCGGCGGTGAAAGATTCTAAAGATTCTACGGTGGCTCATGTAAACCACACCCTGTCTTTGATTGTTCTGATTCAGTTTATTCCTAGGTTGTTTCAGATTTTCCCTCTGCAACGGAGAATCTTGAAGACTAGTGGACTTATTGCCAAAACTGCCTTGGCAGGAGCCGTATACAATCTTGGTTCCTACATGCTCGCCAGCCATGTTTTAGGAGCTTCGTGGTACGTGGCATCAATTCAGAGGCAGTACGACTGTTGGATAATAACCTGCAAAGCGGAGATGAACAGAACGCACTCACCATCTTGTAATCCTTCGTTTCTGGACTGTTCTACCCTGGAACACCGCGAAAGGCAAGCTTGGTTCAAACACACCAGAGTTCTAAGTGATTGCGACGCCCTCAATAACAAAAACGAGTTTCAGTTTGGACTCTTCGCTGATGCTTTTACTGACCACGTTTCCTCATCAAGATTCGTCCAGAAATACTTTTACTGCCTCTGGTGGGGTTTGAAGAATCTAAGTTCATACGGACAAAATCTTCAGACTAGCACCTACAGTGGTGAAACATTGTTTTCGAGTTTCATATGCATAGCAGGTCTAATCCTGTTCGCGCATCTCATTGGTAACATGCAGAATTATCTGCAATCTTCAACTGCAAGAGTTGAAGAGTGGAGACTTAAACAAAAGGATACAGAAGAGTGGATGAATCACCGGCAGCTTCCAGAAGAACTACAACAACGTGTTCGAAGGTTTGTTCAATATAAATGGCTGACTACCAGAGGAGTAGACGAAGAAGCCATTTTGCGTGCTTTACCTTTGGACCTTCGCCGTCAGATTCAGAGGCATCTCTGTCTTGACATTGTTCGTCGGGTTCCATTTTTCGGTCAAATGGATAACCAGCTTCTGGACGCAATATGCGAGAGGCTGGTGTCGTCGCTGAACACGAAGAACACGTACATCGTGCGCGAAGGCGACCCGGTGAGGGAGATGCTATTCATCATCAGAGGGCAGGTGGAGAGCTCCACCACAGACGGTGGCAGAACAGGGTTCTACAATTCCATCACCCTCCGCCCGGGCGACTTCTGCGGCGAGGAGTTGCTCACGTGGGCCCTCATGTCCTCCTCCAGCCTCAACCTTCCCTCCTCCACTCGCACCGTCAAGACCATCACCGAAGTCGAGGCCTTCGCGCTCCGAGCTGAGGACCTCAAGTTCGTGGCCAGCCAGTTCAAGCGCCTCCACAGCAAGAAGCTGCAGCACGCCTTCCGCTACTATTCCCACCAGTGGCGGGCCTGGGGTGCCCACTTCATCCAGGCCGCGTGGCGCCGTCACCGCAAGAGGAAGCTGGCCTTGGAGCTGCTGGGGAAGGAGAGCCTGTTCTATACCAATGTATTGGAGATAGAAGAAGATGATGATGAGGTTGATGCTGGTGATGGAGGTGGTGCGGGTGAGAGTTCGATTGCGCATAGTGTGGGGGCTTTTCAGAATCTTGGGGCTACCGTTTTGGCTTCTAAGTTCGCCGCCAACACCAGAAAAGGAAAGATTAAGAAGGTCAAAATTAATCTTCCCGATTCTGATAGTTTGAAGATGCCCAAGATGTTCAAGCCTACTGAACCCGATTTCTCCACTTTCCACGATTAA 2097 0.5017 MSSDFYRLAVSSHFSSFPKSFSLRKKVPWWYQILNPRSKFVAKWNRTFLYVCIAALFLDPLYFYFPITGDKACMQTDLPLGVFVTLSRTVADLFFLFHMVLKFRTAYIAPTSRVYGRKELVTDPRDIASRYLKSDFIIDLLATLPLPQIVVWFVIPAVKDSKDSTVAHVNHTLSLIVLIQFIPRLFQIFPLQRRILKTSGLIAKTALAGAVYNLGSYMLASHVLGASWYVASIQRQYDCWIITCKAEMNRTHSPSCNPSFLDCSTLEHRERQAWFKHTRVLSDCDALNNKNEFQFGLFADAFTDHVSSSRFVQKYFYCLWWGLKNLSSYGQNLQTSTYSGETLFSSFICIAGLILFAHLIGNMQNYLQSSTARVEEWRLKQKDTEEWMNHRQLPEELQQRVRRFVQYKWLTTRGVDEEAILRALPLDLRRQIQRHLCLDIVRRVPFFGQMDNQLLDAICERLVSSLNTKNTYIVREGDPVREMLFIIRGQVESSTTDGGRTGFYNSITLRPGDFCGEELLTWALMSSSSLNLPSSTRTVKTITEVEAFALRAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRAWGAHFIQAAWRRHRKRKLALELLGKESLFYTNVLEIEEDDDEVDAGDGGGAGESSIAHSVGAFQNLGATVLASKFAANTRKGKIKKVKINLPDSDSLKMPKMFKPTEPDFSTFHD* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02988 698 Gene3D Helix hairpin bin 372 437 - -
Phac9g02988 698 Gene3D Jelly Rolls 444 564 IPR014710 -
Phac9g02988 698 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 25 693 - -
Phac9g02988 698 CDD CAP_ED 446 577 IPR000595 -
Phac9g02988 698 SUPERFAMILY cAMP-binding domain-like 375 571 IPR018490 -
Phac9g02988 698 SMART cnmp_10 446 577 IPR000595 -
Phac9g02988 698 Gene3D - 47 370 - -
Phac9g02988 698 ProSiteProfiles cAMP/cGMP binding motif profile. 446 576 IPR000595 -
Phac9g02988 698 FunFam Cyclic nucleotide-gated ion channel 1 444 562 - -
Phac9g02988 698 Pfam Cyclic nucleotide-binding domain 469 557 IPR000595 -
Phac9g02988 698 Pfam Ion transport protein 44 374 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phac9g02988 698 SUPERFAMILY Voltage-gated potassium channels 36 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02988 Phac-Chr9 29200919 29204797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02988 8 693 Ion Channels AT3G48010 62.623 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02988 K05391 - gmx:100783672 1243.8