Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02985 ATGGAGATTGTGATTTCTTTGATAATATTGTTTGTGGGGATAGCGATTTTGGTGGTTATCCATGTCTGCATCGTGGGGAGAGCCTTCAGAGGGGATAATAATGAAGGTAATCAACAGGGGCAGAACATGAATAGAATGAAAAGAATGTTGGGTGGAGACAACATTGGTGACCTCAAAAACCTTCCTTGCTTTGTGTACGAGGAGGCAGCAGCAGCAGAGAGAAGAGGGTGCAGCCTCGTGGATTGTGTTGTTTGCTTGGACAGTTTCAAGGTTGGTGATGTGTGCAGGTTGTTGCCCAATTGCAACCACACCTTCCATGTGCACTGTATAGACTCCTGGATTCTCCACACACCGATTTGTCCCATTTGTAGAACATGGGTTCTTTCAGTAAGAGAACAACAAACTCATGTTTCTGAGAATGTACAAATTGTAACAACATAG 441 0.4376 MEIVISLIILFVGIAILVVIHVCIVGRAFRGDNNEGNQQGQNMNRMKRMLGGDNIGDLKNLPCFVYEEAAAAERRGCSLVDCVVCLDSFKVGDVCRLLPNCNHTFHVHCIDSWILHTPICPICRTWVLSVREQQTHVSENVQIVTT* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02985 146 Pfam Ring finger domain 81 124 IPR001841 -
Phac9g02985 146 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 3 130 - -
Phac9g02985 146 SMART ring_2 82 123 IPR001841 -
Phac9g02985 146 ProSiteProfiles Zinc finger RING-type profile. 82 124 IPR001841 -
Phac9g02985 146 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 36 128 IPR013083 -
Phac9g02985 146 SUPERFAMILY RING/U-box 59 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02985 Phac-Chr9 29166021 29167195 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02985 58 125 C3H Transcription Factor Family AT2G18670 45.588 9.45e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02985 - - vum:124841729 236.113