Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02984 ATGAAGAGGAGATTAGCAAGCGCCAGCGATGATTCCACTAAACTTGATCGCAAAACCATCGAAAGAAACCGCAGAATCCACATGAAATCCCTCTGCCATCAGCTTGGTTCTCTTATTCCTCCCAACCTGAAACCACCCAAATCCAAGCTGATGCTAGGGCAGCAGGACCAGCTGGATCTTGCAGCACGGTATATCAAACACATGAGAGAGAGAATAGAGAAATTGAAGAGGCAGAAGGAGAAAGCCATGTCAAACCAAAGCAGTGATAGAAAAATGTTGGATAAAAACGTTGACACCAAGTTGCCGGTACTGGAGCTGAGAGACTTGGGTTCCGGCATCGAAGTGATGCTGGTGAGTGGGTTGAACAAGACATTCATGTTGTACGAAGTAATCAATGTTCTTGAGGAAGAAGGTGCTGAAGTTGTCACAGCAAGCTTCTCAACTGTCGGTGACAAGATATTTTACGTTGTTCACGCTCAGGTTAAAATATCAAGGGTTGGAGTGGAGACCACAAGGGTAAAGGATAGACTTCAAGAATTTATTGCCCCATTCGAAATGTGGCCGGAAGACATGTGA 576 0.4514 MKRRLASASDDSTKLDRKTIERNRRIHMKSLCHQLGSLIPPNLKPPKSKLMLGQQDQLDLAARYIKHMRERIEKLKRQKEKAMSNQSSDRKMLDKNVDTKLPVLELRDLGSGIEVMLVSGLNKTFMLYEVINVLEEEGAEVVTASFSTVGDKIFYVVHAQVKISRVGVETTRVKDRLQEFIAPFEMWPEDM* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02984 191 Coils Coil 58 85 - -
Phac9g02984 191 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 10 180 - -
Phac9g02984 191 SMART finulus 18 74 IPR011598 GO:0046983
Phac9g02984 191 FunFam Transcription factor bHLH162 5 96 - -
Phac9g02984 191 Pfam Helix-loop-helix DNA-binding domain 17 68 IPR011598 GO:0046983
Phac9g02984 191 Gene3D - 5 98 IPR036638 GO:0046983
Phac9g02984 191 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 86 IPR036638 GO:0046983
Phac9g02984 191 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 12 68 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02984 Phac-Chr9 29138305 29139917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02984 7 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 35.294 9.07e-26 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac9g02984 HLH 6.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02984 - - gmx:100790403 312.768