Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02973 ATGAAGAACTTGAGGTGGCACAAGCAAATTTCCAACAGTGGCAAGTTGGGGAGAAGGCTTTCGCTTGGGGAGTACAACCGCGCAGTGTCATGGTCTAAGTATCTGGTGTCTCCGGGGGCTGAGATAAAAGGAGAAGGAGAAGAAGAATGGAGTGCAGATATGTCTCAGTTGCTCATTGGATCCAAATTTGCTTCTGGCAGGCACAGCAGAATCTACAGAGGGGTTTACAAGCAAAAAGATGTGGCAATTAAGCTCGTTAGTCAACCGGAGGAAGATGAGGACTTGGCTACTTTTCTTGAGAAGCAATTCACTTCTGAGGTCTCTTTGCTACTTCGATTAGGCCACCCAAATATCATTACTTTTATTGCTGCTTGCAAGAAACCTCCTGTGTTTTGCATAATTACTGAATATTTGGCTGGAGGTTCACTGGGAAAGTTCCTGCACCACCAACAACCAGATATACTTCCACACAAACTGGTTCTGAAGTTAGCCCTTGACATTGCACGGGGGATGCAATATCTTCATTCTCAAGGGATTCTTCATAGGGATCTCAAATCAGAGAATCTCCTCTTGGGGGAAGATATGTGTGTAAAGGTAGCAGATTTTGGTATCTCATGCTTAGAATCTCAGTGTGGCAGTGCAAAAGGTTTCACTGGAACATACCGTTGGATGGCGCCCGAAATGATCAAAGAAAAGCATCATACCAAGAAAGTAGATGTGTATAGTTTTGGCATAGTTCTATGGGAGCTTTTGACAGGAAAGACTCCATTTGACAACATGACACCAGAGCAGGCAGCATTTGCAGTTTCCCACAAGAATGCAAGACCACCATTGCCATGTGAGTGTCCTTGGGCATTTAGTGATCTGATCAATAGATGCTGGTCAAGCAACCCAGATAAGAGGCCTCATTTTGATGAGATAGTTTCCATTTTGGAGTTCTACACAGAATCACTTGAGCAGGATTCAGAGTTTTTGTCAACTTACAAACCGAGTCCTAGTAGTAGTGGTAACACCATTCTGGGGTGCCTCCCCAAATGCAATGCACGCCATAAATTTGGTGCTTGCAAAGCTTAG 1074 0.4423 MKNLRWHKQISNSGKLGRRLSLGEYNRAVSWSKYLVSPGAEIKGEGEEEWSADMSQLLIGSKFASGRHSRIYRGVYKQKDVAIKLVSQPEEDEDLATFLEKQFTSEVSLLLRLGHPNIITFIAACKKPPVFCIITEYLAGGSLGKFLHHQQPDILPHKLVLKLALDIARGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQCGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFGIVLWELLTGKTPFDNMTPEQAAFAVSHKNARPPLPCECPWAFSDLINRCWSSNPDKRPHFDEIVSILEFYTESLEQDSEFLSTYKPSPSSSGNTILGCLPKCNARHKFGACKA* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02973 357 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Phac9g02973 357 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Phac9g02973 357 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Phac9g02973 357 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Phac9g02973 357 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Phac9g02973 357 FunFam Serine/threonine-protein kinase isoform 1 47 139 - -
Phac9g02973 357 Gene3D Transferase(Phosphotransferase) domain 1 140 335 - -
Phac9g02973 357 Pfam Protein tyrosine and serine/threonine kinase 59 311 IPR001245 GO:0004672|GO:0006468
Phac9g02973 357 SUPERFAMILY Protein kinase-like (PK-like) 46 313 IPR011009 -
Phac9g02973 357 SMART serkin_6 57 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g02973 357 Gene3D Phosphorylase Kinase; domain 1 47 138 - -
Phac9g02973 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Phac9g02973 357 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 51 312 - -
Phac9g02973 357 CDD STKc_MAP3K-like 64 311 - -
Phac9g02973 357 ProSiteProfiles Protein kinase domain profile. 57 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02973 Phac-Chr9 28971176 28976353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02973 25 320 MAP Kinase Kinase Kinase AT1G62400 62.333 1.93e-133 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phac9g02973 PK_Tyr_Ser-Thr 4.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02973 - - gmx:100807757 703.745