Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02963 ATGGGTTTATCTTCTTTGCACGTCTGCATGGATTCATCAGATCATTGGTTGCAGGGCACAATTCACGAGGAGTCTGGAATGGATTCTTCTTCTTCACCATCTGGGGACATGCTTACATGCTCAAGGCCCATGCTAGAGAGGAGGCTAAGACCCCCTCATGACCAAGCTCTAAAGTGCCCCAGGTGTGAGTCAACCCACACCAAGTTCTGCTACTACAACAACTATAGTCTCTCTCAGCCAAGGTACTTCTGCAAGACCTGCAGAAGGTACTGGACCAAAGGAGGCACTCTTAGGAACATTCCTGTTGGTGGAGGGTGCAGAAAGAACAAGAAAGTCTCTGCCAAAAAATCCAATGACCACCAATTAGTTAACAATCAAATTAGCCAAACACAGCCCCCACCCTACCATCACAACTCCAAAGACCTTCAACTCTCTTTTCCAGATGTACAATTTTCCCACCTCAGCAACTTGCTTGGGACCAATGCAGGGGCACTGGGAAACCCTAACTTCATGGAGGGCAAGTATGGTATTGGCATGATTGAGAACCCTAGGCCAATTGACTTCATGATGGAGAGCAAGTTGGAGGGCATAATTGGGAGTAGTAGTTCTAGGAATTTTGATTTTTTTGGAAATAGTGATATGGGTATGGGTGGTGGGCTAGGAGATATGAATGGTACTGCTCAAAATGGGTTGCCACCAAATTTTCATGGTCTTTGCTCCCCAGCCTTTGGTGGCATGTCTATGTCCCTTGACGGCAACAACACCAGCAATGGTGCTAATAACTACTTAATGGACTCTTGCCAACGCTTGATGCTGCCTTATGATGCCAATGAGGACCATAATGCCTCAATTGATGTGAAGCCAAACCCTAAGCAACAATTGTCCCTCGAATGGCAAGACCAGGGTTGCTCTGATGCAGGCAAAGACTCATTTGGATATCTGAACGGTCCAGGATCATGGACTGGCATGATGAACGGCTATGGATCTTCCACCACAAACCCTTTGGTCTAA 1011 0.4669 MGLSSLHVCMDSSDHWLQGTIHEESGMDSSSSPSGDMLTCSRPMLERRLRPPHDQALKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSAKKSNDHQLVNNQISQTQPPPYHHNSKDLQLSFPDVQFSHLSNLLGTNAGALGNPNFMEGKYGIGMIENPRPIDFMMESKLEGIIGSSSSRNFDFFGNSDMGMGGGLGDMNGTAQNGLPPNFHGLCSPAFGGMSMSLDGNNTSNGANNYLMDSCQRLMLPYDANEDHNASIDVKPNPKQQLSLEWQDQGCSDAGKDSFGYLNGPGSWTGMMNGYGSSTTNPLV* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02963 336 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 46 210 IPR045174 GO:0003700|GO:0006355
Phac9g02963 336 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
Phac9g02963 336 Pfam Dof domain, zinc finger 54 111 IPR003851 GO:0003677|GO:0006355
Phac9g02963 336 ProSitePatterns Zinc finger Dof-type signature. 59 95 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02963 Phac-Chr9 28757693 28760018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02963 1 336 C2C2-Dof Transcription Factor Family AT5G62940 42.640 1.61e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac9g02963 zf-Dof 2.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02963 - - gmx:778107 563.918