Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02958 ATGGATATTGAGACATTGGCGAAAGAAGGCTTTGTCTCACAGCCCTTGCAAGAAAGTTGTATGAAAGATATGATTCCTTTGGGAAATCCTTCATCTCATGAACTCTCGCAACAACATTTTCACCATGTTGATGAGTTTCAATTCAGTGTGCCCTCATCGATTAATTCAACATTTCATGCTTTTCACAATTTCACCTTTACATCTTCATCACCTGATTTAGATGTATATGAGTGCAAGCCTTTTGTTTTGGACAATTTCCTTTATGGAAATTCTCAAAGGAATATTGAACTAGATATCATGGTTTCAAATGAAAGCTTTTTGCTTTTTACTCCTCAACAAATCAAGCCCTCCAACTTTGTTTTACCAGATGAAGTTTCATGCATATCCCCAATGAATTATTACAAAGGAATTGGCGTTAACAAAAACCATAGATCCTATCCAACCACTCGAAGAACATACAAAGTTCACAAGAAGTCCAACACAGTCAAGGGGCATTGGACAATAGAAGAAGATGGATTATTGATTCAACTGGTGGAACAATACGGATTAAGGAAGTGGTCTCATATTGCTAAGATATTGCCTGGAAGAATTGGAAAACAGTGCAGAGAAAGATGGTATAACCATCTAAGGCCTGATATCAAGTACCCTAGAGGCACCATTCTACAAGAGTATATCAAGAGTTTGAACTTAGACAAGAACCCCCCAAGAGATTATAGGAGAAAATCTTCTGCTAATTATGCTACTCCCATTAATATCAAAACCAGCACAAGCAAAGCCACTGCACCAGCTTTGCCCCAGACAATTTTTCAATTTTGTGCCACTGAATGCTTGGCACCAAATTCTGATTTCAATGTGGTTCCAGATTTTCTCTTTGGTGAGAATTTGTTTGAAGAAGGATGCTGTATCGATTCTCTTCTAGATGGTGTGCCTTGTGTTCCTCTTGGGAATAACAAAATTTTTGAAGGAAAATTGCAATTTGATGGAATGATGGAGGGAATAAAACATTGTGATTATGGAGGAATAGAGTGTGTTGCAGGTGTTAATATGGATGAGAATGATGTTGAGAGAGATATGGCACTAGAGATGTTGGAGGTTCAAGTTAAGAAGGAGCTGGATTTGGTTGAGATGATCTCTCAGATTAATAATGAAACTTTTTATGTGTAA 1164 0.3737 MDIETLAKEGFVSQPLQESCMKDMIPLGNPSSHELSQQHFHHVDEFQFSVPSSINSTFHAFHNFTFTSSSPDLDVYECKPFVLDNFLYGNSQRNIELDIMVSNESFLLFTPQQIKPSNFVLPDEVSCISPMNYYKGIGVNKNHRSYPTTRRTYKVHKKSNTVKGHWTIEEDGLLIQLVEQYGLRKWSHIAKILPGRIGKQCRERWYNHLRPDIKYPRGTILQEYIKSLNLDKNPPRDYRRKSSANYATPINIKTSTSKATAPALPQTIFQFCATECLAPNSDFNVVPDFLFGENLFEEGCCIDSLLDGVPCVPLGNNKIFEGKLQFDGMMEGIKHCDYGGIECVAGVNMDENDVERDMALEMLEVQVKKELDLVEMISQINNETFYV* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02958 387 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 158 213 IPR017930 -
Phac9g02958 387 CDD SANT 166 209 IPR001005 -
Phac9g02958 387 Gene3D - 162 214 - -
Phac9g02958 387 PANTHER MYB PROTEIN-RELATED 145 215 - -
Phac9g02958 387 SMART sant 162 211 IPR001005 -
Phac9g02958 387 ProSiteProfiles Myb-like domain profile. 158 209 IPR001005 -
Phac9g02958 387 FunFam Transcriptional activator Myb isoform A 162 214 - -
Phac9g02958 387 Pfam Myb-like DNA-binding domain 163 209 IPR001005 -
Phac9g02958 387 SUPERFAMILY Homeodomain-like 163 217 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02958 Phac-Chr9 28661749 28663408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02958 112 310 MYB Transcription Factor Family AT4G18770 35.907 5.79e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac9g02958 Myb_DNA-binding 6.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02958 K09422 - gmx:102662267 437.958