Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02949 ATGGATACATTGGTGAAAGAAAGCTTTGTCCCACAACTCTTGCAAGAAAGCTGCACGAAAGATATGATTCCTTTGGGAAATCCTTCATCTCATCAACTCTTGCAACAACATTTTCACCATATTGATGAGTTTCAATTCAGTGTGCCCTCATCGATTAATTCAACATTTCATGCTTTTCACGATTTCACCTTTACACCCTCATCACCTGATTTAGATGTATATGAGTGCAAGCCTTTTGTTATGGACAATTTCCTTTATGGAAATTCTCAAAGAAATAATGAACTAGATATCATGGTTTCAAATCAAAGTTTTTTGCCTTTTACTCCTCAACAAATCAAGCCCTCCAACTTTGTTTTACCAGATGAAGTTTCATGCATATCCCCAATGAATTATTACAAAGGAATTGGCGATAACAAAAACCATAGATCCTATCCAACCACTCGAAGAACATACAAAGTTCACAGGAAGTCCAACACAATCAAGGGGCATTGGACAATAGAAGAAGATGGATTATTGATTCAACTGGTGGAAAAATACGGATTAAGGAAGTGGTCTCATATTGCTAAGATATTGCCTGGAAGAATTGGAAAACAGTGCAGAGAGAGATGGCATAACCATCTAAGGCCTGATATCAAGAAGGACACATGGAATTGTGAAGAAGATAAAATACTAATCGAAGCTCATGCTGAGATTGGAAACAAATGGGCAGAGATTGCTAAAAGGTTGCCTGGAAGAACTGAGAACTCGATCAAAAACCACTGGAATGCGACCAAGAGAAGGCAATATTCCAAAAGAAAGTGTCGATCCAAGTACCCTAGAGGCACCATTCTACAAGAGTATATCAAGAGTTTGAACTTAGACAAGAACCCCCCAAGAGATTATAGGAGAAAATCTTCTGCTAATTATGCTACTCCCATGAATATCAAAACCAGCACAAGCAAAGCCACTGCACCAGCTTTGCCCCAGACAGTTTTTCAATTTTGTGCCACTGAATGCTTGGCATCAAATTCTGATTTCAATGTGGTTCCAGATTTTCTCTTTGGTGAGAATTTGTTTGAAGAAGGATGCTGTATCGATTCTCTTCTAGATGATGTGCCTTGTGTTCCTCAAGAGAATAACAAAATTTTTGAAGGAAAATTGTTATTTGATGGAATGATGGAGGGAATAAAACATTGTGATTATGGAGGAATAGAGTGTGTTGCAGGTGTTAATATGGATGAGAATGATGAAGAGAGAGATATGGCACTAGAGATGTTGGAGGTTGAAGTTAAGAAGGAGTTGGATTTGGTTGAGATGATCTCTCAGATTAATAATGAAACTTTTTATGTGTAA 1332 0.3769 MDTLVKESFVPQLLQESCTKDMIPLGNPSSHQLLQQHFHHIDEFQFSVPSSINSTFHAFHDFTFTPSSPDLDVYECKPFVMDNFLYGNSQRNNELDIMVSNQSFLPFTPQQIKPSNFVLPDEVSCISPMNYYKGIGDNKNHRSYPTTRRTYKVHRKSNTIKGHWTIEEDGLLIQLVEKYGLRKWSHIAKILPGRIGKQCRERWHNHLRPDIKKDTWNCEEDKILIEAHAEIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRSKYPRGTILQEYIKSLNLDKNPPRDYRRKSSANYATPMNIKTSTSKATAPALPQTVFQFCATECLASNSDFNVVPDFLFGENLFEEGCCIDSLLDDVPCVPQENNKIFEGKLLFDGMMEGIKHCDYGGIECVAGVNMDENDEERDMALEMLEVEVKKELDLVEMISQINNETFYV* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02949 443 ProSiteProfiles Myb-like domain profile. 156 207 IPR001005 -
Phac9g02949 443 CDD SANT 215 258 IPR001005 -
Phac9g02949 443 SUPERFAMILY Homeodomain-like 159 254 IPR009057 -
Phac9g02949 443 FunFam Transcriptional activator Myb isoform A 160 213 - -
Phac9g02949 443 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 212 262 IPR017930 -
Phac9g02949 443 Gene3D - 214 275 - -
Phac9g02949 443 SMART sant 212 260 IPR001005 -
Phac9g02949 443 SMART sant 160 209 IPR001005 -
Phac9g02949 443 Pfam Myb-like DNA-binding domain 164 220 - -
Phac9g02949 443 CDD SANT 164 207 IPR001005 -
Phac9g02949 443 PANTHER MYB PROTEIN-RELATED 142 303 - -
Phac9g02949 443 Gene3D - 160 212 - -
Phac9g02949 443 FunFam Transcription factor MYB119 214 278 - -
Phac9g02949 443 ProSiteProfiles Myb-like domain profile. 208 258 IPR001005 -
Phac9g02949 443 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 156 211 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02949 Phac-Chr9 28479945 28481602 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02949 71 366 MYB Transcription Factor Family AT4G18770 48.949 7.21e-94 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac9g02949 Myb_DNA-bind_6 3.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02949 K09422 - gmx:102662267 612.838