Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02928 ATGGTTAGAGGTATGGGTATGAATATAAAAGGAGAAATAGAGAGGGTAAATGGGAAGGAACTGAGTTACAGTGAATTTGTGGAGAGATATATGGAGAAGAACAAACCCGTGGTGCTCACTGGGCTAATGGACCCTCATAATTGGAGAGCTTGCACTGATTGGGTCACACTTAATTCCCAACCCAACTTTCAATTTTTCTCCACTCATTTTGGAGCTTCTAAAGTTCAGGTTGCTGATTGTGACACTAGAGAATTCACTGATCAGAAAAGAGAGGAGATGTTGGTCTCCGATTTTATTGCGCGTTGCCTTCATCTTGGTGAGGCTTCTGCTGTTCAGTGTAATGATGAAACTTGTGCAAGTAATGTTGCCTCTGTATCAGTACCGTATTTGAAGGATTGGCATTTTGTAAAGGAGTATCCTGAATATGTAGCATATGACACTCCAAGGTTCTTTTGTGATGACTGGCTCAATCTGTATCTTGACAACTTCAGAATCCATATTGATTCTGAGAAAGAGCAACCAAATGAGGAAATATGTTGCTCTGACTATCGATTTGTTTACATGGGGGTGAAAGGATCTTGGACTCCTCTTCATGCTGATGTTTTCAGGTCCTACAGCTGGTCGGCAAATGTCTGTGGAAAGAAGAGATGGCTTTTTCTAGATCCTTCCCAATGTCCTCTTATATTTGACAGGAATATGAAAAATTGTGTATATAATATCTTTGATGAAGTATCAAACTCGAAGTTTCCTGGTTTTAGCAAGGCTCTCTGGTTAGAATGCACACAAGATGCTGGTGAAATTATATTTGTTCCCAGCGGATGGTATCATCAAGTTCATAACTTGGAGGATACAATATCTATAAACCACAATTGGTTCAACGCTTATAACCTTTCTTGGGTGTGGAATTTACTTTTAAGGGACTACAATGAGGCCAAGGAATACATAGAAGACATCAAGGATATATGTGATGATTTTGAAGGTCTATGCCAGCGCAATCTTGCTGCTAACACAGGGATGAATTTTTATGACTTCTTTACGTTCATGTCATACTTCACATTGGCCAACTTGGTGTTGCTTCGATATTCAAATAAAAGATATGGAAGTAGTACTGGAAGTTCATCCACAATAGCTCACCATTTATCCATGAATCTTGGGTGTTTAAGGAAGATCGCTTCAGAGATGAAACATATGCGTGCTCTAGAAGGAAATCATAATTGCGTCGTGGATATTATCAAAGTATTTGAAGATCCTAGATTTTCCAAATTATGCATGCATGTAGGAAGAACATATGCCATGGTACATGAGCATTCTCACTTGGCCTCTGATTTCGAGAGCACTACAATGAGTGATTTGGTGGACTTCAATGATTTGAAATCATACTCATCTCAGATCTACACACCTGAAGATCTCATTAAATTTGTAGACAATGGTGTTGCAGAAGCTGAGCCATCTGTACTCCGTGTTGCTTGA 1470 0.3932 MVRGMGMNIKGEIERVNGKELSYSEFVERYMEKNKPVVLTGLMDPHNWRACTDWVTLNSQPNFQFFSTHFGASKVQVADCDTREFTDQKREEMLVSDFIARCLHLGEASAVQCNDETCASNVASVSVPYLKDWHFVKEYPEYVAYDTPRFFCDDWLNLYLDNFRIHIDSEKEQPNEEICCSDYRFVYMGVKGSWTPLHADVFRSYSWSANVCGKKRWLFLDPSQCPLIFDRNMKNCVYNIFDEVSNSKFPGFSKALWLECTQDAGEIIFVPSGWYHQVHNLEDTISINHNWFNAYNLSWVWNLLLRDYNEAKEYIEDIKDICDDFEGLCQRNLAANTGMNFYDFFTFMSYFTLANLVLLRYSNKRYGSSTGSSSTIAHHLSMNLGCLRKIASEMKHMRALEGNHNCVVDIIKVFEDPRFSKLCMHVGRTYAMVHEHSHLASDFESTTMSDLVDFNDLKSYSSQIYTPEDLIKFVDNGVAEAEPSVLRVA* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02928 489 ProSiteProfiles JmjC domain profile. 136 308 IPR003347 -
Phac9g02928 489 Gene3D Cupin 5 292 - -
Phac9g02928 489 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 11 356 - -
Phac9g02928 489 SMART cupin_9 128 308 IPR003347 -
Phac9g02928 489 SUPERFAMILY Clavaminate synthase-like 8 320 - -
Phac9g02928 489 Pfam Cupin-like domain 25 291 IPR041667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02928 Phac-Chr9 28263548 28268023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02928 11 300 Glycosyltransferase AT1G78280 25.168 4.41e-17 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Phac9g02928 Cupin_8 9.4e-23 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02928 - - gsj:114409851 887.1