Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02911 ATGGCATCATCCAGCTCCTACAATTCTCCTTGTGCTGCCTGCAAATTCTTGAGGAGGAAATGCCTTTCAGGGTGCATCTTTGCACCTTACTTCCCACCAGAAGAGCCTCAGAAGTTCGCGAACGTGCACAAGATATTCGGTGCTAGCAATGTGACGAAGCTTCTGAACGAGCTTCTCCCTCACCAGAGGGAAGATGCAGTGAACTCCCTTGCCTATGAAGCTGAGGCACGTGTGAGAGACCCCGTTTATGGCTGCGTAGGAGCCATCTCTTTCCTGCAGAGACAAGTCCAAAGGCTCCAAAAGGAGCTTGATTCTGCCAATGCTGATCTCCTTCGCTATGCCTACAATGACATACCTCCACCCTCTCTTTCTGTGCCACCAGCAATGACAGCAACAACAATTCAACAAATGCCCCAAAGGTCTTTCTGTGCAAGGTTTGGAAATGAAGGAAGTGGGTTTTATAGGCCCTCTCCTACCACCACTTACACCTCTTTCCCTTATTCTCTTCCATGGACTGATACCCCTCCTGAGAATATCAACGATGGACGAGGAGAAGGAGGAGGTAACTTGTGA 573 0.4921 MASSSSYNSPCAACKFLRRKCLSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDSANADLLRYAYNDIPPPSLSVPPAMTATTIQQMPQRSFCARFGNEGSGFYRPSPTTTYTSFPYSLPWTDTPPENINDGRGEGGGNL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02911 190 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Phac9g02911 190 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Phac9g02911 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 131 - -
Phac9g02911 190 Coils Coil 89 116 - -
Phac9g02911 190 MobiDBLite consensus disorder prediction 166 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02911 Phac-Chr9 28048826 28051353 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02911 1 190 AS2 family AT5G63090 61.809 3.50e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac9g02911 LOB 9.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02911 - - gmx:100799774 321.627