Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02879 ATGCCGACGGATTCCTCCGAGCAAGACCTCGACGATCCTGACATCGAATTCGTCGAGGTTGATCCCTCTGGTCGTTATGGTCGGTACAAGGAAGTTTTAGGGAAAGGGGCTTTCAAGAAAGTATATCGAGCGTTTGATGAATTGGAAGGTATTGAAGTGGCTTGGAATCAGATTAAGCTGGCGGATGTGTTGCGTAACTCTGAAGATTTCGAGCGACTTTATTCGGAGGTTCATTTGCTCAAGACTTTGAAGCATAAGAATATAATTAAGTTTTACAACTCATGGATTGACTCCAAGAGCGAGAACGTCAACTTCATTACTGAAATTTTCACCTCAGGAACGTTGCGCCAATACCGGAAGAAACATAAGCATGTTGATTTGAGAGCAGTGAAGAAATGGTCTAAGCAGATTCTGGAAGGCCTTTTCTATCTTCACAGTAATAATCCTCCGATCATTCATCGTGACCTGAAGTGTGATAACATTTTTGTCAATGGGAATCAAGGGGAGGTAAAAATTGGTGATTTAGGATTGGCGGCTATCCTCCAGCAGGCCAATTCAGCTCATAGTGTCATAGGAACTCCGGAGTTCATGGCCCCAGAACTTTACGAAGAGGAATACAACGAGCTTGTTGACATCTATGCTTTTGGTATGTGCTTGCTAGAGTTGGTAACAGTTGAGTACCCGTATGTTGAATGTGCCAATGCTGCCCAAATATACAAGAAAGTGACATCTGGAATAAAGCCAGCATCGTTGGCAAAAGTGATAGATCCTGAAGTTAAAGCATTTATTGAAAAGTGTATTGCTCATGTATCTGAGCGGTTGTCTGCGAAGGACCTCTTGACGGATCCCTTCCTTCAGTCAGATTATGATAATGAAAGTGTAGGCCGATCTTCAAGATCTCAAACCCATCATTCAGGAAATATTTCTCATAATCAAGCTATTGCTGTGGATACTTCTACTGAGGCAAGTAGGGAATTCACGGTGGAAGGTCAGAGGAGAGATGATAATACAATATTTTTAAAATTGAGAATTGCAGATTCCTCAGGTCATATTCGCAATATCCACTTTCCTTTTGATACTGAAGCAGACACTTCAACCTCTGTTGCTAGTGAAATGGTTGAGGAGTTGGAACTTACTGATCAAGATGTTACAACTATTGCTAGGATGATTGACTCTGAAATTCGGTATCACATTCCTAGCTGGAATGTCAGTGAAATTCCTGTTGACAGTTATAGTCAAGATTCAGGCTATACCTCTGAAAGTAAGCCAGAGGCCTCTCCTATGAAACTCGATTCCATTTCTTCTCCTGGCAGTCTCGCATTAGAAGTATTACCTTCAGGTCGAAAGTTCTGGTCGGACTCACCAAGGGGAGTTGGTGGAAACTCTCCATTTCGTGCTGGTAGTTCAAAATTTTGTTTTGCTGCAGATGCAAACGCTGAGGAAGGCAGCCTGGCCTCGAATGGTGATATTTCAGCAGATGATCGTGTTGGTGATTGTAGTGATGAGATTGTTGATTCCCCTTCCAGTGAGAGAAGTATTAAATCAGGAGCAATCAGTGAAAAAGGTCCTCTGAAAGAAATATCTGGAAGCGTGAAAGATTCAGAAACAGAATACATCAATCTCATAGCAGCAAAACTGGAGAAGTTGTTGGATAAACAAAGAGAGGAGTTAGATGAACTAAAGAGGAAGCACAAATTAGCTGTCTCAGATCTTTTGAAGGAACTTTCTCCAGAAATCAGCCAGAAGGTTCTAAATATATGCAACCTAGAGATGCCTGGCGGTGAAATGTAG 1791 0.4193 MPTDSSEQDLDDPDIEFVEVDPSGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQIKLADVLRNSEDFERLYSEVHLLKTLKHKNIIKFYNSWIDSKSENVNFITEIFTSGTLRQYRKKHKHVDLRAVKKWSKQILEGLFYLHSNNPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYVECANAAQIYKKVTSGIKPASLAKVIDPEVKAFIEKCIAHVSERLSAKDLLTDPFLQSDYDNESVGRSSRSQTHHSGNISHNQAIAVDTSTEASREFTVEGQRRDDNTIFLKLRIADSSGHIRNIHFPFDTEADTSTSVASEMVEELELTDQDVTTIARMIDSEIRYHIPSWNVSEIPVDSYSQDSGYTSESKPEASPMKLDSISSPGSLALEVLPSGRKFWSDSPRGVGGNSPFRAGSSKFCFAADANAEEGSLASNGDISADDRVGDCSDEIVDSPSSERSIKSGAISEKGPLKEISGSVKDSETEYINLIAAKLEKLLDKQREELDELKRKHKLAVSDLLKELSPEISQKVLNICNLEMPGGEM* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02879 596 FunFam Probable serine/threonine-protein kinase WNK3 336 427 - -
Phac9g02879 596 MobiDBLite consensus disorder prediction 291 329 - -
Phac9g02879 596 Coils Coil 543 570 - -
Phac9g02879 596 SUPERFAMILY Protein kinase-like (PK-like) 29 286 IPR011009 -
Phac9g02879 596 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g02879 596 CDD STKc_WNK 25 285 - -
Phac9g02879 596 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Phac9g02879 596 MobiDBLite consensus disorder prediction 291 325 - -
Phac9g02879 596 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g02879 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Phac9g02879 596 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g02879 596 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Phac9g02879 596 Gene3D Transferase(Phosphotransferase) domain 1 110 292 - -
Phac9g02879 596 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Phac9g02879 596 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 340 394 IPR024678 GO:0004674|GO:0005524
Phac9g02879 596 Gene3D - 336 422 - -
Phac9g02879 596 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 497 - -
Phac9g02879 596 MobiDBLite consensus disorder prediction 412 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02879 Phac-Chr9 27638510 27642805 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02879 102 584 MAP Kinase Kinase Kinase AT3G48260 55.165 1.70e-168 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Phac9g02879 Pkinase 7.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02879 K08867 - gmx:100272204 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02879 9 27638510 27642805 Phac9g02879 9 27638510 27642805 ECH