Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02856 ATGGTTGTGAAAACTGGGTTATTTGTTTTTTCACTGTTTTTGTTCTTAATCTCCATCGACGCCAAGCTTGAACTCTACCCCGCAGATTTCAAGGCACTCTTGGCTCTGCGAAAGGACCTCGGAGTCAACGGTGAACTGGAGGCAAATGAGGCATGTTACTCGGAGGGTGTGTTCTGCGAGCGAAGGCTCTCGACCAAGGAAACCTACGTGCTCCGAATCACGAGGTTGGTGCTGAAATCCAAGAATCTCAACGGTGTCTTGTCCCCCGCAATAGGACGCCTCACAGAGCTCAAACAACTCTCTCTCTCCCACAACCAACTCGTTGACCGCATCCCTCCCCAAATCGTTGACTGCCGCAAGCTCGAATTCCTTGACCTCTCCAACAACCTCTTCTCCGGCGAGGTCCCCTCCGAACTCTCCTCTCTCACGCGCCTCCGCACGTTGGACATCTCCTCCAACAAACTCTCCGGCAACCTCAACTTCCTCAAGTACTTCCCCAACCTCGAAACCCTCTCCGTCGCCGACAACTTCTTCACCGGAAGGGTGCCTTCTTCCGTCCGCTCCTTCCGCAACCTCCGCCAATTCAACTTCTCCGGCAACAGCTTCCTCGAACCCTCTCTCCGCTTCCAACATTCCTCCTCGTCAGACACCGTTCTCTCCAGACGTTACCTTTTGGACGGTGGTGATGCACCTTCTCCTGCACCTGCCTCAGACAAGAGAAACTCCCAAGCTTCCAATGGTTCCCCTGCAGCGGCACCTGGTCCTTCCCCTAACCACCGAAAACACAAGCACAGTAAGAGAAAACTCGCAGGGTGGATTCTCGGGTTTGTGGCAGGGGCACTGGCGGGAACCTTATCAGGGTTCGTGTTTTCAATGTTGTTCAAGCTGGCTTTGGCGTTGATCAAAGGAAGAGGAAAGAGAGCAGGTCCTGATATTTTTAGTCCCTTGATTAAGAAAGCAGAGGATTTGGCCTTCTTGGAGAAAGAAGAAGGGCTCGCTTCGATGGAAATCATTGGACGTGGTGGCTGTGGAGAGGTTTACAAGGCTGAGTTACCAGGAAGCAATGGCAAAATGATTGCTATAAAGAAAGTGATTCAACCTCCCAAAGATGCTGCTGAATTGGCAGAGGAAGATAGTAAGATTATGCATAAGAAAATGAGGCAAATTCGGTCTGAGATTACAACTGTGGGACAGATTAGACACCGAAACCTTCTGCCTCTGTTAGCGCATGTTTCTAGGCCTGATTGCCACTACCTAGTGTATGAATTCATGAAAAATGGTAGCTTGTTGGACTTGCTGGACAAGGTTGAAAAGGGTGAGGGAGAGTTGGATTGGTTGGCGCGGCATAAAATCATGCTAGGTGTTGCTGCTGGACTTGAATACCTTCACATGAATCACAACCCTCGCATCATTCATAGGGATCTCAAGCCTGGAAATATTCTTCTCGATGATGACATGGAAGCGCGCATAGCTGATTTTGGACTCGCTAAGGCAATGCCGGATTATAAGACTCACATAACCACCTCCAATGTTGCTGGCACTGTGGGGTACATTGCTCCTGAGTATCACCAGATACTTAAGTTCACTGATAAGTGTGATATCTACAGCTTTGGGGTTATCCTTGGGGTGTTGGTGATTGGGAAGCTTCCTTCCGATGAGTTCTTTCAGCATACTGAAGAGATTAGTTTGGTCAAGTGGTTGAGGAAGGTTTTGAGTTCTGAGAATCCCAAGGAGGCCATTGATACGAAGCTGCTTGGAAATGGGTATGAGGAGCAGATGCTTCTGGTTTTGAAGATTGCATGCTTTTGCACCATGGATGATCCCAAGGAGAGGCCTAACAGCAAGGATGTTAGGTGCATGCTGTCTCAGATCAAACACTGA 1881 0.4923 MVVKTGLFVFSLFLFLISIDAKLELYPADFKALLALRKDLGVNGELEANEACYSEGVFCERRLSTKETYVLRITRLVLKSKNLNGVLSPAIGRLTELKQLSLSHNQLVDRIPPQIVDCRKLEFLDLSNNLFSGEVPSELSSLTRLRTLDISSNKLSGNLNFLKYFPNLETLSVADNFFTGRVPSSVRSFRNLRQFNFSGNSFLEPSLRFQHSSSSDTVLSRRYLLDGGDAPSPAPASDKRNSQASNGSPAAAPGPSPNHRKHKHSKRKLAGWILGFVAGALAGTLSGFVFSMLFKLALALIKGRGKRAGPDIFSPLIKKAEDLAFLEKEEGLASMEIIGRGGCGEVYKAELPGSNGKMIAIKKVIQPPKDAAELAEEDSKIMHKKMRQIRSEITTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLLDLLDKVEKGEGELDWLARHKIMLGVAAGLEYLHMNHNPRIIHRDLKPGNILLDDDMEARIADFGLAKAMPDYKTHITTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVILGVLVIGKLPSDEFFQHTEEISLVKWLRKVLSSENPKEAIDTKLLGNGYEEQMLLVLKIACFCTMDDPKERPNSKDVRCMLSQIKH* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02856 626 SUPERFAMILY L domain-like 70 206 - -
Phac9g02856 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Phac9g02856 626 Pfam Leucine rich repeat 97 155 IPR001611 GO:0005515
Phac9g02856 626 MobiDBLite consensus disorder prediction 236 252 - -
Phac9g02856 626 Gene3D Phosphorylase Kinase; domain 1 322 423 - -
Phac9g02856 626 SUPERFAMILY Protein kinase-like (PK-like) 330 621 IPR011009 -
Phac9g02856 626 FunFam leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 319 423 - -
Phac9g02856 626 FunFam Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 140 224 - -
Phac9g02856 626 Gene3D Ribonuclease Inhibitor 140 226 IPR032675 -
Phac9g02856 626 FunFam Leucine-rich repeat receptor-like protein kinase 424 626 - -
Phac9g02856 626 MobiDBLite consensus disorder prediction 229 264 - -
Phac9g02856 626 Gene3D Ribonuclease Inhibitor 28 139 IPR032675 -
Phac9g02856 626 SMART serkin_6 332 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g02856 626 Gene3D Transferase(Phosphotransferase) domain 1 424 626 - -
Phac9g02856 626 ProSiteProfiles Protein kinase domain profile. 332 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g02856 626 Pfam Protein kinase domain 335 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g02856 626 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 70 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02856 Phac-Chr9 27358555 27361092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02856 6 626 Receptor kinase-like Gene Family AT2G31880 63.233 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Phac9g02856 Pkinase 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02856 - - gmx:100811980 1028.85