Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac9g02839 | ATGAGAGCCACGGAGAAGAAATCAGGGATAATGGGAGGGGGTTCGGAGGGAAACGCAGACGTTTTGCCGTGGCTGAAATCGATGCCGGTGGCGCCGGTGTACCGGCCGACTGCGGAGGAGTTCCAAGATCCAATCGGCTACATATTCAAGATCGAGAAGGAAGCGTCCAAGTACGGCATCTGCAAAATCATCCCTCCCTTCCCTCCTTCCCCGAAGAAAACCGCCATCGCCAATCTCAACCGCTCACTTGCCGTTTCAGGTTCCACATTCACCACGCGCCAGCAGCAGATCGGCTTCTGCCCCCGCCGCCCCCGTCCCGTGCAGCGTCCTGTCTGGCAGAGCGGCGATCACTACACCTTCACAGAGTTCGAGTCCAAAGCCAAGTCCTTCGAGAAAGCGTACCTCAAACGCCACACCAGAAAGGGCTCGGGCTCCGGCCCAGGCCCGGGCCCGACCCCGCTTGAGACCGAAACTCTCTTCTGGAAGGCCACGTTGGACAAACCCTTCTCCGTGGAATACGCGAACGACATGCCTGGTTCCGCGTTCTCCCCCAAATGCCGCCATGCTGGGGATCCCACCTCCCTCGCGGACACTCCGTGGAACATGCGAGCGGTTTCGCGGGCCACGGGTTCGCTCTTGCGCTTCATGAAGGAGGAGATTCCGGGCGTTACTTCTCCCATGGTCTACGTCGCCATGCTCTTCAGCTGGTTCGCGTGGCATGTTGAGGACCACGACTTGCACAGCTTGAACTACCTCCACATGGGCGCCGGCAAGACCTGGTACGGCGTCCCCCGTGATGCTGCGGTCGCGTTTGAGGAGGTTGTTAGGGTTCACGGCTACGGTGGAGAGATTAATCCGCTGGTTACATTTGCTATTCTTGGTGAGAAGACCACGGTGATGTCGCCTGAAGTATTTATTAGTGCAGGTGTTCCATGCTGCAGGTTAGTACAAAATGCTGGGGAATTTGTTGTGACGTTTCCAAGAGCCTATCACACAGGGTTTAGTCATGGTTTTAATTGTGGAGAGGCAGCAAACATTGCGACGCCTGAGTGGTTGAGGGTTGCTAAAGATGCTGCCATTCGGAGGGCATCATTAAATTATCCTCCCATGGTTTCACATTTCCAGTTACTTTATGACCTTGCCTTAGCTTTGTGTTCTAGAATTCCTGCGAGCGTCAGTGCTGGACCTCGTAGTTCTCGTCTTAAAGATAAGAAGAAGGGTGAAGGAGAAACTGTAATTAAAGAACTATTTGTCCAAGATGTGTTACAGAACAATGATCTGCTTCATATACTGGGGAAAGGATCTGCTGTAGTACTTCTTCCTCGTAGCTCAGTTGACATTTCTGTTTGCTCAAAATTACGTGTTGGATCCCAGCAATCCATCAATGTAAGCAATTCTGAGGGAATGCATTCCTCAAAAGGTTTTGTTTCTGATGATCTGGTATTCAACAGGAGTCATGGAATCAAGCAAGAAAAAAGTTTCTATTCTGTGAAAGACAAGTTTACTACGATGTATGAAAGGAACAGGATTTCCTCTTTTGATGTAAATGGTAACTCAAGCACTTCAAGTTCTAAGCCACTTCAAAGGGACACTGAGGGAGAAACTAGTGAAGAAGATGGATTGTCAGATCAGAGACTGTTTTCATGTGTCACTTGTGGAATATTAAGCTTTTCTTGTGTTGCTATTGTACAGCCTAGAGATCCAGCAGCTAGATATCTCATGTCAGCTGATTGCAGCTTCTTTAATGATTGGGTTGTTGGTTCTGGAGTATCTAACAGTAAATTTACTACTGCCCCAGAAGAAGCAACTATTCCTATGCCAAATATGTATAATACAGGATGGATGAAAAAAAATGTCCAAGATGGTATGCAAGATGTTTCTGTTCAATCTTCTCGGGATGCTTTAAATATTGAAAGTGAAAAGGGCAATACAGCTCTTGCACTATTGGCTTCAGCATATGGAAATTCTTCTGACTCTGAGGAAGATCAGATTTCAGTTGATGGTCATGAAACAAATGTGCTAAACTCTGCTTCTGAAAGTTTACTTTCTCATACTCAAGATTCCCATGCTAGTCCCATGCCTGCACTTGATAGTGCAGATAATATTCCTTCAAAGAGTGCCGGTTGTGAGGATTTAATGCATCATAAATTTGAGTGTAATTTGAGTCATCAATCTTTAGACCACTCTTTAAAGAAACAGGAGTATAATATCACATCGGGGGTAACATTTGAAAATATGAGGACGGTGCCTAATTCCACCTCCAATTGTTCCCCAGATGCCCATGATGCTGAAAGGTCATTGTCTAAAATGTCTATGGTTCCCTTTGATAATAAAAGTTCTTCCATGGTGTTACAGTCTGATGAAGATTCATCCAGAATGCACGTGTTCTGTCTGGAGCATGCTGCAGAAGCAGAGAAGCAACTTCGCCCCATAGGTGGAGCCCACATATTTCTCCTATGTCATCCAGATTATCCCAAGATAGAGGCTGAAGCAAAAGTGGTGGCAGAAGATTTGGGGATTGATTACACATGGAAGAGTATTGCATACAGGCATGCTTCCAAGGATGATGGGGAGAGGATCCAGTCGGCTCTGGATAGCGAGGAAGCCATTCCTGGGAATGGTGACTGGGCTGTAAAACTAGGGATCAATCTCTTTTATAGCGCATATCTTAGTCGCTCTCCTCTTTATAGTAAGCAGATGCCTTACAATTCTGTTATATACTGTGCATTTGGTTGTAGCTCTCCATCTAGCTTACCCGAAGAGCCAAAGGTCTACCAAAGAAGGGTCAACAGGCAGAAAAAGGTTGTTGCTGGGAAATGGTGTGGTAAAGTTTGGATGTCCAACCAGGTCCATCCCCTTTTAGCGAAAAGAGATTCTGAGGATGCTGAGGATGAGAAAATCCTACTTGGGTGGATATTACCTGATGCGAGAATTGAGAGATCAGAAAGTACCCCCAAAAGTGAAACTACTAGCAGAAAGTCAGGTAAGAAAAGGAAAATGACAGCAGAGAATGGACGAACCAGGAAAGGAAGTTATGCTAAGAAAAATGTAGTTTCATATAATTCATCTGAAGATAAACCCAACTCACAGCCAAGGAGGATTCATAGAAGTAAGAAAGCCAGGAATGTTGAGAGAGATCGTGCTGCTTTGAAAGGGGATAGTTCTCCCTATCATCATCGAAAACCTATAAGCAAACAATCAAACTGTACTGAAAGTGATGCGGTTTCTGATGATTCAGTTGATGATGATGATGATCACATGCAGCATGGGAGGAATTTTGACATTGACAATGATGTGGTTTCAAATGATACAGGGGACTGTGATTCTGATTGGCAGCAGAGGGAAGAACATAGCAGCAAGGACGTTGAAGATATGGAGAGAGATGCACTTTCAGAGGATTCTTTAGATGTTGGTTCTCTTCAGCTGCAAAGGAAGACTTCTGAAGGCAAGCATGCCAAATGCACTAGTGAAGAAGATATAATTTCTGATGACCAAATGGAGAGTTGTTTTCAGAAGCGGCAGAGGAGAACTCCTAAAAGCAGGCAAGCCAAGTATCTGAGTGGAAAAAATATAACATCTGACGACCAGCTAGAGCTGAAAATGCAGAAGGAGCGTCGGAGGAATCCTAAAAACAGGCAAGACAAATACCTCAATGAAGAGGATATTGCTTCAGATGACCAACTTGAGGGCCATTATCGTAGGTATCAAAGAAGGAATCCTAAAGGCAGGCAGGCCAAATGTGTTGCAGAGGAAGATGAAATGTCTGGTGACCAATTGGAGGATCATTGTCAGAAGCTGCAAACAAGTTTCTCTAGGAAAAAGCAAAACAAAGGCATCGATAGAGAAGTTAAATATGTAATGTCTGATGATCAATTGGAGGATCATTTTCCAAAGCAACAGAGAAGAATTCCTAAGAGCAGGCAAAACAAATACACTGATAAAGAAGTTATGGATGACTCGGCTGAAAATAATTCTCGCGTGCTGCATAGAACTCCTAAAAGAAAGCAAGATAAATCCATGGACGAAGATGATTTGAATTCTGATGATGAAATGGAAGATGATCAGCAGCTGAGAAGAACTCTTAGAAGTAAACAATCTAAACCAAAAACACTTCAACAGATGAAGCAAGCCAATTCCCTGCAAGCAAAAAGCCAGGCATCTCGGTCCATAAAGAGGGGATCTCGGGTGCTTGTGAAATCAAAGATTCCTCAGCAAATAAAACCACGGAATAAGCAATCCAGTAACTCCCGAGAGTTTAGTTTACTGATGGAAGATGAGGAAGAAGGTGGACCAAGTACCCGCCTTAGGAAGAGAACCACAAAAGCTCAGGAGAGTGAAGGAAAATTGAAAGACAAGCAAACAAAAAGGAAGAAGGTGAAGAATGCTACAACTGCAAAGGTTTCAGTTGGTCATGCCAAAGGGAAGGATGGGGATGCAGATTATCAATGTGATATTGATGGGTGCAGTATGAGCTTTGGATCAAAACAGGAGCTGCTGCATCACAAGAGAAATATCTGCCCTGTAAAAGGGTGTGGAAAGAAGTTTTTCTCACACAAGTATCTGGTGCAACACCGGCGAGTTCATGAGGATGAGCGACCCTTGAAGTGCCCTTGGAAGGGATGCAAGATGACTTTCAAGTGGGCATGGGCTCGTACTGAGCACATTCGAGTCCACACAGGAGCACGGCCTTATGTATGTGCAGAGCCAGGTTGTGGACAAACATTCAGATTTGTGTCTGATTTCAGTCGTCATAAGCGAAAGACTGGTCATTCGGCGAAGAAGAGTCGTCAATAG | 4794 | 0.4514 | MRATEKKSGIMGGGSEGNADVLPWLKSMPVAPVYRPTAEEFQDPIGYIFKIEKEASKYGICKIIPPFPPSPKKTAIANLNRSLAVSGSTFTTRQQQIGFCPRRPRPVQRPVWQSGDHYTFTEFESKAKSFEKAYLKRHTRKGSGSGPGPGPTPLETETLFWKATLDKPFSVEYANDMPGSAFSPKCRHAGDPTSLADTPWNMRAVSRATGSLLRFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRVHGYGGEINPLVTFAILGEKTTVMSPEVFISAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRVAKDAAIRRASLNYPPMVSHFQLLYDLALALCSRIPASVSAGPRSSRLKDKKKGEGETVIKELFVQDVLQNNDLLHILGKGSAVVLLPRSSVDISVCSKLRVGSQQSINVSNSEGMHSSKGFVSDDLVFNRSHGIKQEKSFYSVKDKFTTMYERNRISSFDVNGNSSTSSSKPLQRDTEGETSEEDGLSDQRLFSCVTCGILSFSCVAIVQPRDPAARYLMSADCSFFNDWVVGSGVSNSKFTTAPEEATIPMPNMYNTGWMKKNVQDGMQDVSVQSSRDALNIESEKGNTALALLASAYGNSSDSEEDQISVDGHETNVLNSASESLLSHTQDSHASPMPALDSADNIPSKSAGCEDLMHHKFECNLSHQSLDHSLKKQEYNITSGVTFENMRTVPNSTSNCSPDAHDAERSLSKMSMVPFDNKSSSMVLQSDEDSSRMHVFCLEHAAEAEKQLRPIGGAHIFLLCHPDYPKIEAEAKVVAEDLGIDYTWKSIAYRHASKDDGERIQSALDSEEAIPGNGDWAVKLGINLFYSAYLSRSPLYSKQMPYNSVIYCAFGCSSPSSLPEEPKVYQRRVNRQKKVVAGKWCGKVWMSNQVHPLLAKRDSEDAEDEKILLGWILPDARIERSESTPKSETTSRKSGKKRKMTAENGRTRKGSYAKKNVVSYNSSEDKPNSQPRRIHRSKKARNVERDRAALKGDSSPYHHRKPISKQSNCTESDAVSDDSVDDDDDHMQHGRNFDIDNDVVSNDTGDCDSDWQQREEHSSKDVEDMERDALSEDSLDVGSLQLQRKTSEGKHAKCTSEEDIISDDQMESCFQKRQRRTPKSRQAKYLSGKNITSDDQLELKMQKERRRNPKNRQDKYLNEEDIASDDQLEGHYRRYQRRNPKGRQAKCVAEEDEMSGDQLEDHCQKLQTSFSRKKQNKGIDREVKYVMSDDQLEDHFPKQQRRIPKSRQNKYTDKEVMDDSAENNSRVLHRTPKRKQDKSMDEDDLNSDDEMEDDQQLRRTLRSKQSKPKTLQQMKQANSLQAKSQASRSIKRGSRVLVKSKIPQQIKPRNKQSSNSREFSLLMEDEEEGGPSTRLRKRTTKAQESEGKLKDKQTKRKKVKNATTAKVSVGHAKGKDGDADYQCDIDGCSMSFGSKQELLHHKRNICPVKGCGKKFFSHKYLVQHRRVHEDERPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSAKKSRQ* | 1598 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac9g02839 | 1597 | MobiDBLite | consensus disorder prediction | 513 | 540 | - | - | |
Phac9g02839 | 1597 | MobiDBLite | consensus disorder prediction | 1041 | 1066 | - | - | |
Phac9g02839 | 1597 | Gene3D | Cupin | 24 | 367 | - | - | |
Phac9g02839 | 1597 | MobiDBLite | consensus disorder prediction | 1196 | 1235 | - | - | |
Phac9g02839 | 1597 | MobiDBLite | consensus disorder prediction | 1366 | 1391 | - | - | |
Phac9g02839 | 1597 | MobiDBLite | consensus disorder prediction | 980 | 1010 | - | - | |
Phac9g02839 | 1597 | SMART | JmjN_1 | 30 | 71 | IPR003349 | - | |
Phac9g02839 | 1597 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 1536 | 1558 | IPR013087 | - | |
Phac9g02839 | 1597 | ProSiteProfiles | JmjC domain profile. | 194 | 363 | IPR003347 | - | |
Phac9g02839 | 1597 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 1504 | 1533 | IPR013087 | - | |
Phac9g02839 | 1597 | MobiDBLite | consensus disorder prediction | 1420 | 1452 | - | - | |
Phac9g02839 | 1597 | FunFam | Probable lysine-specific demethylase ELF6 | 1561 | 1590 | - | - | |
Phac9g02839 | 1597 | MobiDBLite | consensus disorder prediction | 1274 | 1342 | - | - | |
Phac9g02839 | 1597 | FunFam | Probable lysine-specific demethylase ELF6 | 1531 | 1560 | - | - | |
Phac9g02839 | 1597 | Pfam | JmjC domain, hydroxylase | 227 | 345 | IPR003347 | - | |
Phac9g02839 | 1597 | Gene3D | Classic Zinc Finger | 1533 | 1561 | - | - | |
Phac9g02839 | 1597 | Gene3D | Classic Zinc Finger | 1562 | 1596 | - | - | |
Phac9g02839 | 1597 | Gene3D | Classic Zinc Finger | 1504 | 1532 | - | - | |
Phac9g02839 | 1597 | SMART | c2h2final6 | 1534 | 1558 | IPR013087 | - | |
Phac9g02839 | 1597 | SMART | c2h2final6 | 1504 | 1528 | IPR013087 | - | |
Phac9g02839 | 1597 | SMART | c2h2final6 | 1564 | 1590 | IPR013087 | - | |
Phac9g02839 | 1597 | SMART | c2h2final6 | 1481 | 1503 | IPR013087 | - | |
Phac9g02839 | 1597 | SUPERFAMILY | beta-beta-alpha zinc fingers | 1544 | 1588 | IPR036236 | - | |
Phac9g02839 | 1597 | MobiDBLite | consensus disorder prediction | 1108 | 1133 | - | - | |
Phac9g02839 | 1597 | Coils | Coil | 1442 | 1462 | - | - | |
Phac9g02839 | 1597 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 1506 | 1528 | IPR013087 | - | |
Phac9g02839 | 1597 | SUPERFAMILY | Clavaminate synthase-like | 191 | 381 | - | - | |
Phac9g02839 | 1597 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 1534 | 1563 | IPR013087 | - | |
Phac9g02839 | 1597 | MobiDBLite | consensus disorder prediction | 1405 | 1419 | - | - | |
Phac9g02839 | 1597 | ProSiteProfiles | JmjN domain profile. | 31 | 72 | IPR003349 | - | |
Phac9g02839 | 1597 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 1564 | 1595 | IPR013087 | - | |
Phac9g02839 | 1597 | SMART | cupin_9 | 194 | 363 | IPR003347 | - | |
Phac9g02839 | 1597 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 1566 | 1590 | IPR013087 | - | |
Phac9g02839 | 1597 | MobiDBLite | consensus disorder prediction | 980 | 1136 | - | - | |
Phac9g02839 | 1597 | SUPERFAMILY | beta-beta-alpha zinc fingers | 1504 | 1540 | IPR036236 | - | |
Phac9g02839 | 1597 | FunFam | Probable lysine-specific demethylase ELF6 | 24 | 367 | - | - | |
Phac9g02839 | 1597 | MobiDBLite | consensus disorder prediction | 1171 | 1466 | - | - | |
Phac9g02839 | 1597 | PANTHER | LYSINE-SPECIFIC DEMETHYLASE | 23 | 1157 | - | - | |
Phac9g02839 | 1597 | Pfam | jmjN domain | 32 | 65 | IPR003349 | - | |
Phac9g02839 | 1597 | MobiDBLite | consensus disorder prediction | 513 | 529 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac9g02839 | Phac-Chr9 | 27144058 | 27154072 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac9g02839 | 792 | 886 | C2H2 Transcription Factor Family | AT5G04240 | 34.737 | 4.37e-14 | 76.3 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Phac9g02839 | JmjC | 1.2e-35 | CL0029 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac9g02839 | - | - | gmx:100775271 | 2656.71 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phac9g02839 | 9 | 27144058 | 27154072 | Phac9g02839 | 9 | 27144058 | 27154072 | ECH |