Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02839 ATGAGAGCCACGGAGAAGAAATCAGGGATAATGGGAGGGGGTTCGGAGGGAAACGCAGACGTTTTGCCGTGGCTGAAATCGATGCCGGTGGCGCCGGTGTACCGGCCGACTGCGGAGGAGTTCCAAGATCCAATCGGCTACATATTCAAGATCGAGAAGGAAGCGTCCAAGTACGGCATCTGCAAAATCATCCCTCCCTTCCCTCCTTCCCCGAAGAAAACCGCCATCGCCAATCTCAACCGCTCACTTGCCGTTTCAGGTTCCACATTCACCACGCGCCAGCAGCAGATCGGCTTCTGCCCCCGCCGCCCCCGTCCCGTGCAGCGTCCTGTCTGGCAGAGCGGCGATCACTACACCTTCACAGAGTTCGAGTCCAAAGCCAAGTCCTTCGAGAAAGCGTACCTCAAACGCCACACCAGAAAGGGCTCGGGCTCCGGCCCAGGCCCGGGCCCGACCCCGCTTGAGACCGAAACTCTCTTCTGGAAGGCCACGTTGGACAAACCCTTCTCCGTGGAATACGCGAACGACATGCCTGGTTCCGCGTTCTCCCCCAAATGCCGCCATGCTGGGGATCCCACCTCCCTCGCGGACACTCCGTGGAACATGCGAGCGGTTTCGCGGGCCACGGGTTCGCTCTTGCGCTTCATGAAGGAGGAGATTCCGGGCGTTACTTCTCCCATGGTCTACGTCGCCATGCTCTTCAGCTGGTTCGCGTGGCATGTTGAGGACCACGACTTGCACAGCTTGAACTACCTCCACATGGGCGCCGGCAAGACCTGGTACGGCGTCCCCCGTGATGCTGCGGTCGCGTTTGAGGAGGTTGTTAGGGTTCACGGCTACGGTGGAGAGATTAATCCGCTGGTTACATTTGCTATTCTTGGTGAGAAGACCACGGTGATGTCGCCTGAAGTATTTATTAGTGCAGGTGTTCCATGCTGCAGGTTAGTACAAAATGCTGGGGAATTTGTTGTGACGTTTCCAAGAGCCTATCACACAGGGTTTAGTCATGGTTTTAATTGTGGAGAGGCAGCAAACATTGCGACGCCTGAGTGGTTGAGGGTTGCTAAAGATGCTGCCATTCGGAGGGCATCATTAAATTATCCTCCCATGGTTTCACATTTCCAGTTACTTTATGACCTTGCCTTAGCTTTGTGTTCTAGAATTCCTGCGAGCGTCAGTGCTGGACCTCGTAGTTCTCGTCTTAAAGATAAGAAGAAGGGTGAAGGAGAAACTGTAATTAAAGAACTATTTGTCCAAGATGTGTTACAGAACAATGATCTGCTTCATATACTGGGGAAAGGATCTGCTGTAGTACTTCTTCCTCGTAGCTCAGTTGACATTTCTGTTTGCTCAAAATTACGTGTTGGATCCCAGCAATCCATCAATGTAAGCAATTCTGAGGGAATGCATTCCTCAAAAGGTTTTGTTTCTGATGATCTGGTATTCAACAGGAGTCATGGAATCAAGCAAGAAAAAAGTTTCTATTCTGTGAAAGACAAGTTTACTACGATGTATGAAAGGAACAGGATTTCCTCTTTTGATGTAAATGGTAACTCAAGCACTTCAAGTTCTAAGCCACTTCAAAGGGACACTGAGGGAGAAACTAGTGAAGAAGATGGATTGTCAGATCAGAGACTGTTTTCATGTGTCACTTGTGGAATATTAAGCTTTTCTTGTGTTGCTATTGTACAGCCTAGAGATCCAGCAGCTAGATATCTCATGTCAGCTGATTGCAGCTTCTTTAATGATTGGGTTGTTGGTTCTGGAGTATCTAACAGTAAATTTACTACTGCCCCAGAAGAAGCAACTATTCCTATGCCAAATATGTATAATACAGGATGGATGAAAAAAAATGTCCAAGATGGTATGCAAGATGTTTCTGTTCAATCTTCTCGGGATGCTTTAAATATTGAAAGTGAAAAGGGCAATACAGCTCTTGCACTATTGGCTTCAGCATATGGAAATTCTTCTGACTCTGAGGAAGATCAGATTTCAGTTGATGGTCATGAAACAAATGTGCTAAACTCTGCTTCTGAAAGTTTACTTTCTCATACTCAAGATTCCCATGCTAGTCCCATGCCTGCACTTGATAGTGCAGATAATATTCCTTCAAAGAGTGCCGGTTGTGAGGATTTAATGCATCATAAATTTGAGTGTAATTTGAGTCATCAATCTTTAGACCACTCTTTAAAGAAACAGGAGTATAATATCACATCGGGGGTAACATTTGAAAATATGAGGACGGTGCCTAATTCCACCTCCAATTGTTCCCCAGATGCCCATGATGCTGAAAGGTCATTGTCTAAAATGTCTATGGTTCCCTTTGATAATAAAAGTTCTTCCATGGTGTTACAGTCTGATGAAGATTCATCCAGAATGCACGTGTTCTGTCTGGAGCATGCTGCAGAAGCAGAGAAGCAACTTCGCCCCATAGGTGGAGCCCACATATTTCTCCTATGTCATCCAGATTATCCCAAGATAGAGGCTGAAGCAAAAGTGGTGGCAGAAGATTTGGGGATTGATTACACATGGAAGAGTATTGCATACAGGCATGCTTCCAAGGATGATGGGGAGAGGATCCAGTCGGCTCTGGATAGCGAGGAAGCCATTCCTGGGAATGGTGACTGGGCTGTAAAACTAGGGATCAATCTCTTTTATAGCGCATATCTTAGTCGCTCTCCTCTTTATAGTAAGCAGATGCCTTACAATTCTGTTATATACTGTGCATTTGGTTGTAGCTCTCCATCTAGCTTACCCGAAGAGCCAAAGGTCTACCAAAGAAGGGTCAACAGGCAGAAAAAGGTTGTTGCTGGGAAATGGTGTGGTAAAGTTTGGATGTCCAACCAGGTCCATCCCCTTTTAGCGAAAAGAGATTCTGAGGATGCTGAGGATGAGAAAATCCTACTTGGGTGGATATTACCTGATGCGAGAATTGAGAGATCAGAAAGTACCCCCAAAAGTGAAACTACTAGCAGAAAGTCAGGTAAGAAAAGGAAAATGACAGCAGAGAATGGACGAACCAGGAAAGGAAGTTATGCTAAGAAAAATGTAGTTTCATATAATTCATCTGAAGATAAACCCAACTCACAGCCAAGGAGGATTCATAGAAGTAAGAAAGCCAGGAATGTTGAGAGAGATCGTGCTGCTTTGAAAGGGGATAGTTCTCCCTATCATCATCGAAAACCTATAAGCAAACAATCAAACTGTACTGAAAGTGATGCGGTTTCTGATGATTCAGTTGATGATGATGATGATCACATGCAGCATGGGAGGAATTTTGACATTGACAATGATGTGGTTTCAAATGATACAGGGGACTGTGATTCTGATTGGCAGCAGAGGGAAGAACATAGCAGCAAGGACGTTGAAGATATGGAGAGAGATGCACTTTCAGAGGATTCTTTAGATGTTGGTTCTCTTCAGCTGCAAAGGAAGACTTCTGAAGGCAAGCATGCCAAATGCACTAGTGAAGAAGATATAATTTCTGATGACCAAATGGAGAGTTGTTTTCAGAAGCGGCAGAGGAGAACTCCTAAAAGCAGGCAAGCCAAGTATCTGAGTGGAAAAAATATAACATCTGACGACCAGCTAGAGCTGAAAATGCAGAAGGAGCGTCGGAGGAATCCTAAAAACAGGCAAGACAAATACCTCAATGAAGAGGATATTGCTTCAGATGACCAACTTGAGGGCCATTATCGTAGGTATCAAAGAAGGAATCCTAAAGGCAGGCAGGCCAAATGTGTTGCAGAGGAAGATGAAATGTCTGGTGACCAATTGGAGGATCATTGTCAGAAGCTGCAAACAAGTTTCTCTAGGAAAAAGCAAAACAAAGGCATCGATAGAGAAGTTAAATATGTAATGTCTGATGATCAATTGGAGGATCATTTTCCAAAGCAACAGAGAAGAATTCCTAAGAGCAGGCAAAACAAATACACTGATAAAGAAGTTATGGATGACTCGGCTGAAAATAATTCTCGCGTGCTGCATAGAACTCCTAAAAGAAAGCAAGATAAATCCATGGACGAAGATGATTTGAATTCTGATGATGAAATGGAAGATGATCAGCAGCTGAGAAGAACTCTTAGAAGTAAACAATCTAAACCAAAAACACTTCAACAGATGAAGCAAGCCAATTCCCTGCAAGCAAAAAGCCAGGCATCTCGGTCCATAAAGAGGGGATCTCGGGTGCTTGTGAAATCAAAGATTCCTCAGCAAATAAAACCACGGAATAAGCAATCCAGTAACTCCCGAGAGTTTAGTTTACTGATGGAAGATGAGGAAGAAGGTGGACCAAGTACCCGCCTTAGGAAGAGAACCACAAAAGCTCAGGAGAGTGAAGGAAAATTGAAAGACAAGCAAACAAAAAGGAAGAAGGTGAAGAATGCTACAACTGCAAAGGTTTCAGTTGGTCATGCCAAAGGGAAGGATGGGGATGCAGATTATCAATGTGATATTGATGGGTGCAGTATGAGCTTTGGATCAAAACAGGAGCTGCTGCATCACAAGAGAAATATCTGCCCTGTAAAAGGGTGTGGAAAGAAGTTTTTCTCACACAAGTATCTGGTGCAACACCGGCGAGTTCATGAGGATGAGCGACCCTTGAAGTGCCCTTGGAAGGGATGCAAGATGACTTTCAAGTGGGCATGGGCTCGTACTGAGCACATTCGAGTCCACACAGGAGCACGGCCTTATGTATGTGCAGAGCCAGGTTGTGGACAAACATTCAGATTTGTGTCTGATTTCAGTCGTCATAAGCGAAAGACTGGTCATTCGGCGAAGAAGAGTCGTCAATAG 4794 0.4514 MRATEKKSGIMGGGSEGNADVLPWLKSMPVAPVYRPTAEEFQDPIGYIFKIEKEASKYGICKIIPPFPPSPKKTAIANLNRSLAVSGSTFTTRQQQIGFCPRRPRPVQRPVWQSGDHYTFTEFESKAKSFEKAYLKRHTRKGSGSGPGPGPTPLETETLFWKATLDKPFSVEYANDMPGSAFSPKCRHAGDPTSLADTPWNMRAVSRATGSLLRFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRVHGYGGEINPLVTFAILGEKTTVMSPEVFISAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRVAKDAAIRRASLNYPPMVSHFQLLYDLALALCSRIPASVSAGPRSSRLKDKKKGEGETVIKELFVQDVLQNNDLLHILGKGSAVVLLPRSSVDISVCSKLRVGSQQSINVSNSEGMHSSKGFVSDDLVFNRSHGIKQEKSFYSVKDKFTTMYERNRISSFDVNGNSSTSSSKPLQRDTEGETSEEDGLSDQRLFSCVTCGILSFSCVAIVQPRDPAARYLMSADCSFFNDWVVGSGVSNSKFTTAPEEATIPMPNMYNTGWMKKNVQDGMQDVSVQSSRDALNIESEKGNTALALLASAYGNSSDSEEDQISVDGHETNVLNSASESLLSHTQDSHASPMPALDSADNIPSKSAGCEDLMHHKFECNLSHQSLDHSLKKQEYNITSGVTFENMRTVPNSTSNCSPDAHDAERSLSKMSMVPFDNKSSSMVLQSDEDSSRMHVFCLEHAAEAEKQLRPIGGAHIFLLCHPDYPKIEAEAKVVAEDLGIDYTWKSIAYRHASKDDGERIQSALDSEEAIPGNGDWAVKLGINLFYSAYLSRSPLYSKQMPYNSVIYCAFGCSSPSSLPEEPKVYQRRVNRQKKVVAGKWCGKVWMSNQVHPLLAKRDSEDAEDEKILLGWILPDARIERSESTPKSETTSRKSGKKRKMTAENGRTRKGSYAKKNVVSYNSSEDKPNSQPRRIHRSKKARNVERDRAALKGDSSPYHHRKPISKQSNCTESDAVSDDSVDDDDDHMQHGRNFDIDNDVVSNDTGDCDSDWQQREEHSSKDVEDMERDALSEDSLDVGSLQLQRKTSEGKHAKCTSEEDIISDDQMESCFQKRQRRTPKSRQAKYLSGKNITSDDQLELKMQKERRRNPKNRQDKYLNEEDIASDDQLEGHYRRYQRRNPKGRQAKCVAEEDEMSGDQLEDHCQKLQTSFSRKKQNKGIDREVKYVMSDDQLEDHFPKQQRRIPKSRQNKYTDKEVMDDSAENNSRVLHRTPKRKQDKSMDEDDLNSDDEMEDDQQLRRTLRSKQSKPKTLQQMKQANSLQAKSQASRSIKRGSRVLVKSKIPQQIKPRNKQSSNSREFSLLMEDEEEGGPSTRLRKRTTKAQESEGKLKDKQTKRKKVKNATTAKVSVGHAKGKDGDADYQCDIDGCSMSFGSKQELLHHKRNICPVKGCGKKFFSHKYLVQHRRVHEDERPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSAKKSRQ* 1598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02839 1597 MobiDBLite consensus disorder prediction 513 540 - -
Phac9g02839 1597 MobiDBLite consensus disorder prediction 1041 1066 - -
Phac9g02839 1597 Gene3D Cupin 24 367 - -
Phac9g02839 1597 MobiDBLite consensus disorder prediction 1196 1235 - -
Phac9g02839 1597 MobiDBLite consensus disorder prediction 1366 1391 - -
Phac9g02839 1597 MobiDBLite consensus disorder prediction 980 1010 - -
Phac9g02839 1597 SMART JmjN_1 30 71 IPR003349 -
Phac9g02839 1597 ProSitePatterns Zinc finger C2H2 type domain signature. 1536 1558 IPR013087 -
Phac9g02839 1597 ProSiteProfiles JmjC domain profile. 194 363 IPR003347 -
Phac9g02839 1597 ProSiteProfiles Zinc finger C2H2 type domain profile. 1504 1533 IPR013087 -
Phac9g02839 1597 MobiDBLite consensus disorder prediction 1420 1452 - -
Phac9g02839 1597 FunFam Probable lysine-specific demethylase ELF6 1561 1590 - -
Phac9g02839 1597 MobiDBLite consensus disorder prediction 1274 1342 - -
Phac9g02839 1597 FunFam Probable lysine-specific demethylase ELF6 1531 1560 - -
Phac9g02839 1597 Pfam JmjC domain, hydroxylase 227 345 IPR003347 -
Phac9g02839 1597 Gene3D Classic Zinc Finger 1533 1561 - -
Phac9g02839 1597 Gene3D Classic Zinc Finger 1562 1596 - -
Phac9g02839 1597 Gene3D Classic Zinc Finger 1504 1532 - -
Phac9g02839 1597 SMART c2h2final6 1534 1558 IPR013087 -
Phac9g02839 1597 SMART c2h2final6 1504 1528 IPR013087 -
Phac9g02839 1597 SMART c2h2final6 1564 1590 IPR013087 -
Phac9g02839 1597 SMART c2h2final6 1481 1503 IPR013087 -
Phac9g02839 1597 SUPERFAMILY beta-beta-alpha zinc fingers 1544 1588 IPR036236 -
Phac9g02839 1597 MobiDBLite consensus disorder prediction 1108 1133 - -
Phac9g02839 1597 Coils Coil 1442 1462 - -
Phac9g02839 1597 ProSitePatterns Zinc finger C2H2 type domain signature. 1506 1528 IPR013087 -
Phac9g02839 1597 SUPERFAMILY Clavaminate synthase-like 191 381 - -
Phac9g02839 1597 ProSiteProfiles Zinc finger C2H2 type domain profile. 1534 1563 IPR013087 -
Phac9g02839 1597 MobiDBLite consensus disorder prediction 1405 1419 - -
Phac9g02839 1597 ProSiteProfiles JmjN domain profile. 31 72 IPR003349 -
Phac9g02839 1597 ProSiteProfiles Zinc finger C2H2 type domain profile. 1564 1595 IPR013087 -
Phac9g02839 1597 SMART cupin_9 194 363 IPR003347 -
Phac9g02839 1597 ProSitePatterns Zinc finger C2H2 type domain signature. 1566 1590 IPR013087 -
Phac9g02839 1597 MobiDBLite consensus disorder prediction 980 1136 - -
Phac9g02839 1597 SUPERFAMILY beta-beta-alpha zinc fingers 1504 1540 IPR036236 -
Phac9g02839 1597 FunFam Probable lysine-specific demethylase ELF6 24 367 - -
Phac9g02839 1597 MobiDBLite consensus disorder prediction 1171 1466 - -
Phac9g02839 1597 PANTHER LYSINE-SPECIFIC DEMETHYLASE 23 1157 - -
Phac9g02839 1597 Pfam jmjN domain 32 65 IPR003349 -
Phac9g02839 1597 MobiDBLite consensus disorder prediction 513 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02839 Phac-Chr9 27144058 27154072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02839 792 886 C2H2 Transcription Factor Family AT5G04240 34.737 4.37e-14 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac9g02839 JmjC 1.2e-35 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02839 - - gmx:100775271 2656.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02839 9 27144058 27154072 Phac9g02839 9 27144058 27154072 ECH