Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac9g02838 | ATGGAGCCCTCTGAATCCGAATCAGTTAGTTCCCCCACCAAGGACCCGCAATTGGGTGAACCTTTCACCCCTGTTCACCCACTCGATCATGATCCTCAACCCTCAGATCTCAATCACGTTGCCCAAGATGATGCTGCACTTGGTGGGGAGCTTGAGGACAAGTTGGATTTGAAGGATGAGGGTGAGAGTGAGGATAAAGGTTCGAACTTGGAAGATGGGGGTGGAAATTTGAGTGATGAAGGTGCTGCCCCTGAAGGTGGTAAGGGAGAAGGGAGTGAGGATGATGGTGGTGGTGATGTTGTTGTTGTTGTTGATGATGACGATGATGATTGCAATGGGGGTGACGAGGGGTGTGATTGGATTGAGAATGTGAATGAGAGTGAAAGTGATAAGGTGAGTGGAGATGTGGAGGGAGTGGAGTGTAGGGATGAAAGGAGCAGTGGGAGAGCTCAACAGTACCCCTTGAGGCCTGAGGCTGAAGACTGTGCGTTTTATCTCAAAACTGGAACTTGCAAATTTGGATTCAATTGCAAATTCAATCATCCGCTTAAGAGGAAAAACCAGGCTAAAAAAGAGAATGCGGGAGAAAAAGAAGAACAGGCAGAAAGATCAGGGCAGACGGAATGCAAGTATTATTTAAGATCTGGGGGGTGTAAGTTTGGAAAGGCTTGTAAGTTTAATCACACAAGGGGAATGTCTTCAACATCCTCAATTGTAGAGCTTAACTTCCTTGGCCTGCCTATTCGAGTGGGAGAGAAAGAGTGTCACTATTACATGCGTACTGGCTCTTGTAAGTTTGGAGCAAACTGCAAGTTTAATCATCCCGATCCTACGGCTGGAGGAGGTGATTCTCCTTCTGGATATGGTAATGGAAGTTCTATTTCATTACAAGCTAATCCAGTGGTTTCTCCTCAAAGTTCTGAATGGGATGGATATCAGGCACCTGTCTATCTACCTGAGAGGAATATGCATCTACCTTCAACATATGTCATGAACAACCCAGCTATGGAAACAAATGTTTATATGCACCATCAAAAACAAATGCAGGTTGAAGAGTTTCCAGAAAGGCCTGGTGAACCTGAATGCAGCTATTTCTTAAAAACAGGGGATTGCAAGTTTAAATCTAATTGTAAGTTTCACCATCCAAAGAATCGGATTGCAAGATTACCTCCATGCAGTCTTAGTGACAAGGGTCTACCTTTGAGACCGGACCAGAATGTTTGCACATATTACAGCCGTTATGGAATTTGCAAATTCGGACCAGCTTGTAAGTTCGACCACCCACCACCCTCAACTATAAGTGGACTTGATCAACAATCCTCTTACACAAATTCTGCAAGTGTTGATGTGGCTGAAAATGGAGGTGTCAGTGATGGGAACCAACTGTCTCTATAA | 1395 | 0.4466 | MEPSESESVSSPTKDPQLGEPFTPVHPLDHDPQPSDLNHVAQDDAALGGELEDKLDLKDEGESEDKGSNLEDGGGNLSDEGAAPEGGKGEGSEDDGGGDVVVVVDDDDDDCNGGDEGCDWIENVNESESDKVSGDVEGVECRDERSSGRAQQYPLRPEAEDCAFYLKTGTCKFGFNCKFNHPLKRKNQAKKENAGEKEEQAERSGQTECKYYLRSGGCKFGKACKFNHTRGMSSTSSIVELNFLGLPIRVGEKECHYYMRTGSCKFGANCKFNHPDPTAGGGDSPSGYGNGSSISLQANPVVSPQSSEWDGYQAPVYLPERNMHLPSTYVMNNPAMETNVYMHHQKQMQVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPPCSLSDKGLPLRPDQNVCTYYSRYGICKFGPACKFDHPPPSTISGLDQQSSYTNSASVDVAENGGVSDGNQLSL* | 465 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac9g02838 | 464 | SUPERFAMILY | CCCH zinc finger | 361 | 385 | IPR036855 | GO:0046872 | |
Phac9g02838 | 464 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Phac9g02838 | 464 | SUPERFAMILY | CCCH zinc finger | 155 | 184 | IPR036855 | GO:0046872 | |
Phac9g02838 | 464 | ProSiteProfiles | Zinc finger C3H1-type profile. | 356 | 384 | IPR000571 | GO:0046872 | |
Phac9g02838 | 464 | SMART | c3hfinal6 | 402 | 429 | IPR000571 | GO:0046872 | |
Phac9g02838 | 464 | SMART | c3hfinal6 | 156 | 183 | IPR000571 | GO:0046872 | |
Phac9g02838 | 464 | SMART | c3hfinal6 | 203 | 230 | IPR000571 | GO:0046872 | |
Phac9g02838 | 464 | SMART | c3hfinal6 | 251 | 276 | IPR000571 | GO:0046872 | |
Phac9g02838 | 464 | SMART | c3hfinal6 | 356 | 383 | IPR000571 | GO:0046872 | |
Phac9g02838 | 464 | Gene3D | - | 193 | 279 | - | - | |
Phac9g02838 | 464 | Gene3D | - | 400 | 449 | - | - | |
Phac9g02838 | 464 | PANTHER | PROTEIN PHOSPHATASE RELATED | 30 | 439 | - | - | |
Phac9g02838 | 464 | ProSiteProfiles | Zinc finger C3H1-type profile. | 203 | 231 | IPR000571 | GO:0046872 | |
Phac9g02838 | 464 | MobiDBLite | consensus disorder prediction | 285 | 306 | - | - | |
Phac9g02838 | 464 | MobiDBLite | consensus disorder prediction | 99 | 116 | - | - | |
Phac9g02838 | 464 | MobiDBLite | consensus disorder prediction | 46 | 69 | - | - | |
Phac9g02838 | 464 | SUPERFAMILY | CCCH zinc finger | 400 | 427 | IPR036855 | GO:0046872 | |
Phac9g02838 | 464 | MobiDBLite | consensus disorder prediction | 280 | 306 | - | - | |
Phac9g02838 | 464 | ProSiteProfiles | Zinc finger C3H1-type profile. | 402 | 430 | IPR000571 | GO:0046872 | |
Phac9g02838 | 464 | SUPERFAMILY | CCCH zinc finger | 206 | 230 | IPR036855 | GO:0046872 | |
Phac9g02838 | 464 | ProSiteProfiles | Zinc finger C3H1-type profile. | 249 | 277 | IPR000571 | GO:0046872 | |
Phac9g02838 | 464 | MobiDBLite | consensus disorder prediction | 1 | 121 | - | - | |
Phac9g02838 | 464 | Gene3D | - | 312 | 391 | - | - | |
Phac9g02838 | 464 | Gene3D | - | 132 | 192 | - | - | |
Phac9g02838 | 464 | SUPERFAMILY | CCCH zinc finger | 250 | 276 | IPR036855 | GO:0046872 | |
Phac9g02838 | 464 | ProSiteProfiles | Zinc finger C3H1-type profile. | 156 | 184 | IPR000571 | GO:0046872 | |
Phac9g02838 | 464 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 358 | 383 | IPR000571 | GO:0046872 | |
Phac9g02838 | 464 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 405 | 429 | IPR000571 | GO:0046872 | |
Phac9g02838 | 464 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 252 | 275 | IPR000571 | GO:0046872 | |
Phac9g02838 | 464 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 160 | 182 | IPR000571 | GO:0046872 | |
Phac9g02838 | 464 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 206 | 228 | IPR000571 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac9g02838 | Phac-Chr9 | 27133226 | 27138026 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac9g02838 | 352 | 451 | C2H2 Transcription Factor Family | AT3G02830 | 46.602 | 6.44e-22 | 95.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Phac9g02838 | zf-CCCH | 6.5e-09 | CL0537 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac9g02838 | - | - | gmx:100809906 | 641.343 |