Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02834 ATGGTTAACAAGAAAATCAATCTCAATGATTCAAGTGGGCAGCAGTGGAAGGTTAAAGTATCAGAAGTTAATGGTTCTTTTGTTTTTGGGGAGGGATGGAGTAGTTTCTCATTGGGTCTTGGGCTTAAAGTTGGATATCTCTTGGTATTCAATTACGTTAAGGATTTGCACTTTGATGTCAAGATCTATGATACTTCTGCCTGTGAAAAGCTAGGCTTTTCTAAAAAAAGAGGTCAGAAGAAAAGAAGTAGGGGCAAAATTGTCTCACCAGTTAGAGATGGTATCTTGGTCAGACAAGAACCCAATGCGCCAAAAATGAAAAGGCAGTGCAGCGAGGTTGACTTAGATTTACCACAAAACTCTAAAGAGAGTGGCCAACTTATGCACATATCAGATCACTGTGAAGACCCATGTTATTCAAAAAGCCTAGAATTTGACCAGAGCCATGGTGATGATGGGACCATGAAAATTGAGAACGGAGATTTAAAAGTTTCTAATGTTGATTATGAATCCAATATATTTGAAAAGGATGCAATGACATGCAGTAAAGATACTATGTTTGAAGGGATATTCAGTACGGAAGTTGCCTTGGATATATCTGAACTCGAAAAATCTGGAAGAAGTGCTTCTCTAGGTGAGGCAGAGACAAGTACATATGGCAAGACTTCTAATTTGAAAATTGAAGAGAACAAAGCCATCTTGTCCAACATGGAAGCTCAAGAGTGCCAATTTTCCAAGGGCTTAGTTATTATGATTACTGGTGAAATGAAGAAATTGCCTGAGGACATGACTCCCAACTTGGACAGTTCCATGGATGAATTGAATTTAACAGGTGAAGTGTCTAAACAGTTGAAGAAAGAGCTTGTAACTCTCATTGAATTGGAAGCAACAGGGTTGCCCACGGAAATTAAGGGACTGTTGGACTCTGACATATTTAATGAAGATAATGCGAGACACTCTAAAACTACACACCTCTCCTGTGTGGTTCCTCATGATAATGTTTGCCTTGTACAGTATTAA 1020 0.3873 MVNKKINLNDSSGQQWKVKVSEVNGSFVFGEGWSSFSLGLGLKVGYLLVFNYVKDLHFDVKIYDTSACEKLGFSKKRGQKKRSRGKIVSPVRDGILVRQEPNAPKMKRQCSEVDLDLPQNSKESGQLMHISDHCEDPCYSKSLEFDQSHGDDGTMKIENGDLKVSNVDYESNIFEKDAMTCSKDTMFEGIFSTEVALDISELEKSGRSASLGEAETSTYGKTSNLKIEENKAILSNMEAQECQFSKGLVIMITGEMKKLPEDMTPNLDSSMDELNLTGEVSKQLKKELVTLIELEATGLPTEIKGLLDSDIFNEDNARHSKTTHLSCVVPHDNVCLVQY* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02834 339 CDD B3_DNA 4 64 IPR003340 GO:0003677
Phac9g02834 339 PANTHER B3 DOMAIN-CONTAINING 4 200 - -
Phac9g02834 339 SUPERFAMILY DNA-binding pseudobarrel domain 3 70 IPR015300 -
Phac9g02834 339 Gene3D - 1 68 IPR015300 -
Phac9g02834 339 ProSiteProfiles B3 DNA-binding domain profile. 1 66 IPR003340 GO:0003677
Phac9g02834 339 Pfam B3 DNA binding domain 4 64 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02834 Phac-Chr9 27032439 27036623 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02834 6 69 B3 DNA Binding Superfamily AT4G01580 32.812 2.62e-07 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac9g02834 B3 2.4e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02834 - - vra:106761496 473.011