Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02832 ATGGGTGGCGAGGAACAAGGAGTTTCTGTTTGTGCTGCCTGCATCAACAACTGTCTATTGTTCCACCCAACCAAACCAACTTCACCTACCTCTTTCTTCAAGTTCATCACTAGACAAGATTATTTAACAACTTTGTGTATTCCTCCTGCTTTTAGTAGTATTGTGGCCAACATGGTTAACAAGAAAATCAATCTCAATGATTCAAGTGGGCAGCAGTGGAAGGTTAAAGTATCAGAAGTTAATGGTTCTTTTGTTTTTGGGGAGGGATGGAGTAGTTTCTCATTGGGTCTTGGGCTTAAAGTTGGATATCTCTTGGTATTCAATTACGTTAAGGATTTGCACTTTGATGTCAAGATCTATGATACTTCTGCCTGTGAAAAGCTAGGCTTTTCTAAAAAAAGAGGTCAGAAGAAAAGAAGTAGGGGCAAAATTGTCTCACCAGTTAGAGATGGTATCTTGGTCAGACAAGAACCCAATGCGCCAAAAATGAAAAGGCAGTGCAGCGAGGTTGACTTAGATTTACCACAAAACTCTAAAGAGAGTGGCCAACTTATGCACATATCAGATCACTGTGAAGACCCATGTTATTCAAAAAGCCTAGAATTTGACCAGAGCCATGGTGATGATGGGACCATGAAAATTGAGAACGGAGATTTAAAAGTTTCTAATGTTGATTATGAATCCAATATATTTGAAAAGGATGCAATGACATGCAGTAAAGATACTATGTTTGAAGGGATATTCAGTACGGAAGTTGCCTTGGATATATCTGAACTCGAAAAATCTGGAAGAAGTGCTTCTCTAGGTGAGGCAGAGACAAGTACATATGGCAAGACTTCTAATTTGAAAATTGAAGAGAACAAAGCCATCTTGTCCAACATGGAAGCTCAAGAGTGCCAATTTTCCAAGGGCTTAGGTGAAGTGTCTAAACAGTTGAAGAAAGAGCTTGTAACTCTCATTGAATTGGAAGCAACAGGGTTGCCCACGGAAATTAAGGGACTGTTGGACTCTGACATATTTAATGAAGATAATGCGAGACACTCTAAAACTACACACCTCTCCTGTGTGGTTCCTCATGATAATGTTTGCCTTAAACTGCCCAAATGCCTGCCTATGATTCGCAAGGTAAAAGTAGATCAGCAAAGGAAGATGGTAGTATTTCTTCGGGATCCACTGAGGAGATTGTGGCCGGTCTTTTACCATGAAAAACCGCATTTACAATTACTGGCACATGGATGGTTAGATTTTTGCAGAGCTAATAACATTCAAGCGAAAGATGAGTGTATTTTTGAGGCTGAGGTTGATCCTGAGTGCAAGTCTAAACATATCTTATCAGTTCATATAGTCCATAACAAGTGA 1359 0.3966 MGGEEQGVSVCAACINNCLLFHPTKPTSPTSFFKFITRQDYLTTLCIPPAFSSIVANMVNKKINLNDSSGQQWKVKVSEVNGSFVFGEGWSSFSLGLGLKVGYLLVFNYVKDLHFDVKIYDTSACEKLGFSKKRGQKKRSRGKIVSPVRDGILVRQEPNAPKMKRQCSEVDLDLPQNSKESGQLMHISDHCEDPCYSKSLEFDQSHGDDGTMKIENGDLKVSNVDYESNIFEKDAMTCSKDTMFEGIFSTEVALDISELEKSGRSASLGEAETSTYGKTSNLKIEENKAILSNMEAQECQFSKGLGEVSKQLKKELVTLIELEATGLPTEIKGLLDSDIFNEDNARHSKTTHLSCVVPHDNVCLKLPKCLPMIRKVKVDQQRKMVVFLRDPLRRLWPVFYHEKPHLQLLAHGWLDFCRANNIQAKDECIFEAEVDPECKSKHILSVHIVHNK* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02832 452 CDD B3_DNA 379 431 IPR003340 GO:0003677
Phac9g02832 452 PANTHER B3 DOMAIN-CONTAINING 28 432 - -
Phac9g02832 452 SUPERFAMILY DNA-binding pseudobarrel domain 377 447 IPR015300 -
Phac9g02832 452 Gene3D - 25 125 IPR015300 -
Phac9g02832 452 ProSiteProfiles B3 DNA-binding domain profile. 30 123 IPR003340 GO:0003677
Phac9g02832 452 Gene3D - 336 452 IPR015300 -
Phac9g02832 452 ProSiteProfiles B3 DNA-binding domain profile. 386 452 IPR003340 GO:0003677
Phac9g02832 452 SMART B3_2 32 123 IPR003340 GO:0003677
Phac9g02832 452 SUPERFAMILY DNA-binding pseudobarrel domain 28 125 IPR015300 -
Phac9g02832 452 Pfam B3 DNA binding domain 32 121 IPR003340 GO:0003677
Phac9g02832 452 CDD B3_DNA 31 121 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02832 Phac-Chr9 27032439 27036623 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02832 26 126 B3 DNA Binding Superfamily AT4G01580 31.429 4.56e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac9g02832 B3 7.9e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02832 - - vra:106761496 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02832 9 27032439 27036623 Phac9g02832 9 27032439 27036623 ECH