Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02831 ATGGGTGGCGAGGAACAAGGAGTTTCTGTTTGTGCTGCCTGCATCAACAACTGTCTATTGTTCCACCCAACCAAACCAACTTCACCTACCTCTTTCTTCAAGTTCATCACTAGACAAGATTATTTAACAACTTTGTGTATTCCTCCTGCTTTTAGTAGTATTGTGGCCAACATGGTTAACAAGAAAATCAATCTCAATGATTCAAGTGGGCAGCAGTGGAAGGTTAAAGTATCAGAAGTTAATGGTTCTTTTGTTTTTGGGGAGGGATGGAGTAGTTTCTCATTGGGTCTTGGGCTTAAAGTTGGATATCTCTTGGTATTCAATTACGTTAAGGATTTGCACTTTGATGTCAAGATCTATGATACTTCTGCCTGTGAAAAGCTAGGCTTTTCTAAAAAAAGAGGTCAGAAGAAAAGAAGTAGGGGCAAAATTGTCTCACCAGTTAGAGATGGTATCTTGGTCAGACAAGAACCCAATGCGCCAAAAATGAAAAGGCAGTGCAGCGAGGTTGACTTAGATTTACCACAAAACTCTAAAGAGAGTGGCCAACTTATGCACATATCAGATCACTGTGAAGACCCATGTTATTCAAAAAGCCTAGAATTTGACCAGAGCCATGGTGATGATGGGACCATGAAAATTGAGAACGGAGATTTAAAAGTTTCTAATGTTGATTATGAATCCAATATATTTGAAAAGGATGCAATGACATGCAGTAAAGATACTATGTTTGAAGGGATATTCAGTACGGAAGTTGCCTTGGATATATCTGAACTCGAAAAATCTGGAAGAAGTGCTTCTCTAGGTGAGGCAGAGACAAGTACATATGGCAAGACTTCTAATTTGAAAATTGAAGAGAACAAAGCCATCTTGTCCAACATGGAAGCTCAAGAGTGCCAATTTTCCAAGGGCTTAGGTGAAGTGTCTAAACAGTTGAAGAAAGAGCTTGTAACTCTCATTGAATTGGAAGCAACAGGGTTGCCCACGGAAATTAAGGGACTGTTGGACTCTGACATATTTAATGAAGATAATGCGAGACACTCTAAAACTACACACCTCTCCTGTGTGGTTCCTCATGATAATGTTTGCCTTGTACAGTATTAA 1104 0.394 MGGEEQGVSVCAACINNCLLFHPTKPTSPTSFFKFITRQDYLTTLCIPPAFSSIVANMVNKKINLNDSSGQQWKVKVSEVNGSFVFGEGWSSFSLGLGLKVGYLLVFNYVKDLHFDVKIYDTSACEKLGFSKKRGQKKRSRGKIVSPVRDGILVRQEPNAPKMKRQCSEVDLDLPQNSKESGQLMHISDHCEDPCYSKSLEFDQSHGDDGTMKIENGDLKVSNVDYESNIFEKDAMTCSKDTMFEGIFSTEVALDISELEKSGRSASLGEAETSTYGKTSNLKIEENKAILSNMEAQECQFSKGLGEVSKQLKKELVTLIELEATGLPTEIKGLLDSDIFNEDNARHSKTTHLSCVVPHDNVCLVQY* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02831 367 PANTHER B3 DOMAIN-CONTAINING 28 315 - -
Phac9g02831 367 Pfam B3 DNA binding domain 32 121 IPR003340 GO:0003677
Phac9g02831 367 SUPERFAMILY DNA-binding pseudobarrel domain 28 125 IPR015300 -
Phac9g02831 367 ProSiteProfiles B3 DNA-binding domain profile. 30 123 IPR003340 GO:0003677
Phac9g02831 367 SMART B3_2 32 123 IPR003340 GO:0003677
Phac9g02831 367 CDD B3_DNA 31 121 IPR003340 GO:0003677
Phac9g02831 367 Gene3D - 25 125 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02831 Phac-Chr9 27032439 27036623 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02831 26 126 B3 DNA Binding Superfamily AT4G01580 31.429 2.23e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac9g02831 B3 5.5e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02831 - - vra:106761496 531.946