Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac9g02827 | ATGGCGGCGGTGGCGGAGGCGAGGAAGGCTCCACGGCCGGGCAAGGGCGGCTACGAAGCACACGGCCTGAGCGAGGAAGAAGCGCGTGTTCGAGCAATCGCGGAGATCGTGAACTCCATGGTGGACCTCTCTCACAAGGGACAGAACGTGGACCTCAACGCGCTCAAGTCTGCAGCGTGCCGCAAGTACGGCCTTGCACGCGCACCTAAGCTCGTGGAGATGATAGCCGCGCTCCCCGACGCGGAGCGCGAAACACTCCTCCCCAAGCTCCGCGCCAAGCCCGTCCGCACCGCCTCTGGAATCGCCGTAGTTGCCGTCATGTCCAAACCGCATCGCTGCCCGCACATCGCTACCACCGGGAACATCTGTGTTTACTGCCCCGGCGGTCCCGACTCCGACTTCGAATACAGTACTCAGTCCTACACCGGTTATGAACCAACCAGCATGCGCGCGATTCGTGCGAGGTATAATCCATATGTCCAGGCGAGGAGCAGAATAGATCAGCTTAAGCGTTTGGGTCATAGCGTAGACAAGGTTGAGTTTATCTTAATGGGTGGTACCTTCATGTCACTTCCAGCTGATTACCGTGATTACTTTATTAGGAATCTTCATGATGCTTTGTCTGGGCACACATCTGTCAATGTGGAAGAGGCAGTAGCTTACTCCGAGCATGGAGCAACCAAGTGTATTGGCATGACAATTGAAACGAGGCCAGATTATTGTCTGGGGCCTCACTTGCGCCAAATGCTTTCTTATGGTTGTACACGATTGGAGATTGGAGTCCAAAGCACCTATGAGGATGTTGCTCGAGACACAAATAGAGGACACACTGTAGCTGCTGTAGCCGATTGTTTTTGCTTAGCTAAAGATGCTGGTTTCAAGGTTGTTGCTCACATGATGCCAGATCTTCCAAATGTTGGTGTTGAGAGGGACATGGAAAGTTTTCGGGAGTTTTTTGAGAGTCCCTTGTTTAGAGCTGATGGGCTTAAAATATATCCTACACTTGTAATTCGTGGAACAGGGCTTTATGAGCTCTGGAAAACTGGCAGGTATAGAAATTATCCACCTGAGCAACTTGTGGACATCATAGCTAGGATCCTTGCATTGGTACCCCCATGGACACGTGTTTATAGAGTTCAGCGGGATATTCCCATGCCTTTGGTTACCTCCGGGGTTGAGAAAGGGAATTTGAGGGAGCTAGCATTAGCTCGAATGGAGGACCTGGGATTGAAATGTCGTGATGTGCGGACCAGGGAAGCTGGAATCCAGGATATTCACCACCAAATTAGGCCAGAGGAGGTGGAGCTAGTACGGCGTGATTATATGGCAAATGAGGGTTGGGAAACATTTCTATCATATGAAGATACACGACAAGATATCCTTGTTGGTTTGCTAAGACTGCGAAAATGCGGCCGCAATACTACATGTCCAGAGCTTATGGGGAAGTGTTCTATTGTTCGTGAACTCCATGTTTATGGAACTGCCGTACCAGTTCATGGACGGGATACTGACAAGCTACAACACCAGGGTTATGGTACACTTTTAATGGAGGAGGCAGAGCGTATTGCTTGCAGCGAGCACAGATCAACCAAAATTGCTGTAATTTCAGGGGTGGGCACACGCCATTATTACAGGAAACTGGGATATGAGCTTGAAGGACCTTACATGGTGAAATATTTAGTGAAATAA | 1689 | 0.5009 | MAAVAEARKAPRPGKGGYEAHGLSEEEARVRAIAEIVNSMVDLSHKGQNVDLNALKSAACRKYGLARAPKLVEMIAALPDAERETLLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSVNVEEAVAYSEHGATKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDMESFREFFESPLFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIIARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMEDLGLKCRDVRTREAGIQDIHHQIRPEEVELVRRDYMANEGWETFLSYEDTRQDILVGLLRLRKCGRNTTCPELMGKCSIVRELHVYGTAVPVHGRDTDKLQHQGYGTLLMEEAERIACSEHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKYLVK* | 563 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac9g02827 | 562 | FunFam | Elongator complex protein 3 | 409 | 561 | - | - | |
Phac9g02827 | 562 | PIRSF | HAT_Elp3 | 18 | 561 | IPR034687 | - | |
Phac9g02827 | 562 | NCBIfam | tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 | 48 | 560 | IPR034687 | - | |
Phac9g02827 | 562 | PANTHER | HISTONE ACETYLTRANSFERASE-RELATED | 14 | 560 | IPR039661 | - | |
Phac9g02827 | 562 | SMART | MiaB | 103 | 365 | IPR006638 | GO:0003824|GO:0051536 | |
Phac9g02827 | 562 | SFLD | elongater protein-like | 51 | 560 | - | - | |
Phac9g02827 | 562 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Phac9g02827 | 562 | SFLD | ELP3-like | 51 | 560 | IPR034687 | - | |
Phac9g02827 | 562 | CDD | Radical_SAM | 110 | 357 | - | - | |
Phac9g02827 | 562 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 369 | 556 | IPR016181 | - | |
Phac9g02827 | 562 | SUPERFAMILY | Radical SAM enzymes | 133 | 372 | - | - | |
Phac9g02827 | 562 | Gene3D | - | 412 | 561 | - | - | |
Phac9g02827 | 562 | Pfam | Acetyltransferase (GNAT) family | 413 | 549 | IPR000182 | GO:0016747 | |
Phac9g02827 | 562 | ProSiteProfiles | Radical SAM core domain profile. | 96 | 386 | IPR007197 | GO:0003824|GO:0051536 | |
Phac9g02827 | 562 | Pfam | Radical SAM superfamily | 121 | 309 | IPR007197 | GO:0003824|GO:0051536 | |
Phac9g02827 | 562 | Pfam | Radical_SAM C-terminal domain | 327 | 406 | IPR032432 | - | |
Phac9g02827 | 562 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 410 | 562 | IPR000182 | GO:0016747 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac9g02827 | Phac-Chr9 | 26990609 | 26995400 | Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | GNAT | Phac9g02827 | Radical_SAM | 2.4e-17 | CL0036 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac9g02827 | K07739 | - | gmx:100818764 | 1121.3 |