Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02797 ATGGGGTTTCATGACTTTGTTTTGCTATTTTGTTCAGTTTGGTGTGTCTTTTTTGTGGGTAGTTGCAGTTCTCAGTTGCAGTCCTCTCAAACCCAAGTGCTTCTCCAGTTGAAAAAGCACTTGGAGTACCCAAGACAATTGGAAATATGGAGAGATCGTTGGACAGATCTTTGCTCTATTTCTTCTTCTGGGCAAGTGAATGTCACATGCAAGGACAATTTTGTCACTGAGCTCTCCATCTTGGGTGATAAGCCAACCAAGGGTAGAGATTTTGATGGGTTTGCCATTCCTAATCAAACACTATCAGATATCTTCTCCATGGACTCTTTTGTGGCTACTCTGGCAAGGTTAACTGGCCTGAGAGTCCTTAGTCTTGTGTCTTTGGGCATGTGGGGACCACTGCCTGATAGAATTCACAGACTTTATGCACTAGAACATTTGGACTTGAGTTCCAATTATCTTTATGGATCAATCCCTCCAAAGATTTGCACAATGGTGAACCTTCAAACTCTTGGATTGGGTGATAACTTCTTCAATGGTACCATCCCAAACTTGTTCAATTCATCAAGCAATCTCTCAGTTCTTAGTTTGAGGAATAACAGGTTGAAGGGTCCATTTCCACCTTCAATCCTTAGTGTCGCCTCTTTAAAAGACATTGACATGTCAAGCAATCAAATATCAGGGATCCTGCAAGATTTTAGTGCTTTGAGTAGTTTGGAACAGCTAGATTTAAGAGAAAACAAATTAGAGTCTTTCCTCCCAGCAATGCCAAAAGGGTTGACTAGTCTTTTCTTCAGCAGAAATTCCTTCTCAGGTGAAATTCCCAAGCACTATGGTCAACTTAACGGGCTTCGGAAGCTAGATGTTTCCTTCAATGCACTCACTGGCACTGCTCCTGCTGAACTTTTCTCTTTGCCCAACATCAGTTACTTGAATTTGGCTTCCAACTTGTTGAATGGACCACTGCAAAGTCACCTAAGATGTAGCAGCCAACTTACATTTGTTGACATATCATACAATAGGTTAGTGGGGGACTTACCTTCTTCACTGAGCACTAGATCAGAAACTAGAGTTGTTATGAGTGATGGAAACTGTTTATCTGGGAGTGTGCAGCATCAGCATGCAGTATCCTACTGCACAGAACCTCATGTGAAGAAGAAATCATATAGAGTTGGAATTTTTGTTGGTGTCATTGTAGGAATTCTTTTAATCTCTGTGGTTTTGGCTTTGGCCATTGTTATAACTTGTAAGAAGTTCTTCCTTCGAGGTGTGTCAGAGAAGCACCTATTGCATAAAACTGTTCAAGATAGCAGCTACGCACCAGGGTTCTCCTCTGAGCTTGTCACAAATGCAAGGTATATTTATGAAACTGCCAAGTTAGGCAGAGAAGACCTCCCCACATGTAGGTCGTACTCTTTGGAAGAGCTAAAGGAAGCCACAAATAACTTTGATAACTCTACTTTTATGGGTGAAAATATATATGGGAAGCTTTACAGAGGAAAACTGGAGAGTGGGATACAGATTGTAATAAGGTCCTTGCCTGTGTCAAAAAAGTATTCAGTTAGAAATTTCAAACTGAGGTTGGATTTGCTTGCAAAGCTCCGTCACCCTCATTTGGTATCCCTCCTAGGTCACTGCATTGATGGTGTTGTAGGAGAGAATAATGACACAAATGTCTTTCTCATTTATGAATATGTGCCTAATGGGACTTTTCAAACTTATGTCTCTGCCGTGCTAAGTGGATATAATAGCATCTTGGAATATTTAAATTGCTTTGGAATCCATTCAAAGAGTGAAACAAGCTTGAGTAGGCATCTGTTTTCCAACTTGCATTCAGACCCTCAAATTGAAATATAA 1857 0.406 MGFHDFVLLFCSVWCVFFVGSCSSQLQSSQTQVLLQLKKHLEYPRQLEIWRDRWTDLCSISSSGQVNVTCKDNFVTELSILGDKPTKGRDFDGFAIPNQTLSDIFSMDSFVATLARLTGLRVLSLVSLGMWGPLPDRIHRLYALEHLDLSSNYLYGSIPPKICTMVNLQTLGLGDNFFNGTIPNLFNSSSNLSVLSLRNNRLKGPFPPSILSVASLKDIDMSSNQISGILQDFSALSSLEQLDLRENKLESFLPAMPKGLTSLFFSRNSFSGEIPKHYGQLNGLRKLDVSFNALTGTAPAELFSLPNISYLNLASNLLNGPLQSHLRCSSQLTFVDISYNRLVGDLPSSLSTRSETRVVMSDGNCLSGSVQHQHAVSYCTEPHVKKKSYRVGIFVGVIVGILLISVVLALAIVITCKKFFLRGVSEKHLLHKTVQDSSYAPGFSSELVTNARYIYETAKLGREDLPTCRSYSLEELKEATNNFDNSTFMGENIYGKLYRGKLESGIQIVIRSLPVSKKYSVRNFKLRLDLLAKLRHPHLVSLLGHCIDGVVGENNDTNVFLIYEYVPNGTFQTYVSAVLSGYNSILEYLNCFGIHSKSETSLSRHLFSNLHSDPQIEI* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02797 618 Pfam Leucine rich repeat 283 342 IPR001611 GO:0005515
Phac9g02797 618 Pfam Leucine rich repeat 190 249 IPR001611 GO:0005515
Phac9g02797 618 Gene3D Ribonuclease Inhibitor 27 208 IPR032675 -
Phac9g02797 618 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 260 384 - -
Phac9g02797 618 Gene3D Ribonuclease Inhibitor 209 388 IPR032675 -
Phac9g02797 618 Gene3D Phosphorylase Kinase; domain 1 450 565 - -
Phac9g02797 618 SUPERFAMILY Protein kinase-like (PK-like) 465 579 IPR011009 -
Phac9g02797 618 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 258 - -
Phac9g02797 618 SMART LRR_typ_2 141 165 IPR003591 -
Phac9g02797 618 SMART LRR_typ_2 213 235 IPR003591 -
Phac9g02797 618 SMART LRR_typ_2 281 305 IPR003591 -
Phac9g02797 618 SMART LRR_typ_2 236 259 IPR003591 -
Phac9g02797 618 SUPERFAMILY L domain-like 29 371 - -
Phac9g02797 618 ProSiteProfiles Protein kinase domain profile. 483 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g02797 618 Pfam Protein tyrosine and serine/threonine kinase 489 577 IPR001245 GO:0004672|GO:0006468
Phac9g02797 618 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 386 575 - -
Phac9g02797 618 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 446 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02797 Phac-Chr9 26752862 26758224 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02797 8 580 Miscellaneous Gene Families AT5G14210 49.744 4.58e-177 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Phac9g02797 PK_Tyr_Ser-Thr 1e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02797 - - gmx:100802978 944.11