Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02792 ATGGCCGCTCTCACCTCTCTCTCCCTCTCGCTCCGCCCCCTCTCTCTCCGCCGCAAACCAACCACATCAATCTCCGCTTCACTCTCTTCACTACCAGGGAACACCCATGAGTCTACAACCAAAGCGCCTCGGAGAAGAGCCAGGCGAATCGAAGGCCCTAGAAAGAGCATGGAGGACTCGGTTCAACGCAAGATGGAGCAGTTTTACGAAGGCTCCGACGGGCCTCCGCTTCGCGTTCTTCCCATTGGCGGTTTGGGGGAGATTGGGATGAACTGCATGCTCGTCGGCAACCATGACCGCTATATCCTCATCGACGCCGGTGTCATGTTTCCAGACTATGACGAACTTGGAGTTCAGAAGATTATTCCTGACACCACTTTTATAAGAAAGTGGAGCCACAAAATTGAGGCGCTTGTCATAACACACGGTCATGAAGATCATATTGGTGCGTTGCCTTGGGTCATCCCGGCATTGGATTCCAATACACCAATTTTTTCATCTTCATTTACAAAGGAGCTTATAAACAAACGTTTGAAGGAACATGGTATTTTTGTTCCATCTAGACTCAAAGTATTTAGAATGAGGAAGAAGTTTGTGGCTGGGCCATTTGAGATAGAACCTATTAGGGTGACCCATTCTATTCCTGATTGTTGTGGACTAGTTCTTCGCTGTTCTGATGGTACTATTCTTCACACTGGGGACTGGAAGATTGATGAGACACCACTAGATGGGAATGTTTTTGATCGTGAAGCTTTAGAGGAACTCTCTAAAGAGGGAGTAACATTGATGATGAGTGATTCAACAAATGTACTCTCACCTGGTAGGACAATCAGTGAATCAGTAGTGGCAGATGCATTGTTGAGACATATTTCAGCTTCTAATGGAAGGGTCATTACCACCCAATTTGCATCAAATTTACATCGGCTCGGAAGTGTGAAAGCTGCTGCTGATTTAACTGGCAGAAAGTTGGTATTTGTTGGCATGTCCTTAAGGACATATTTAGATGCAGCTTGGAAGGATGGAAAGGCACCAATTGATCCATCCACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCTCCAAAGGATCTGCTAATTGTAACAACAGGTTCTCAAGCAGAACCTCGTGCTGCCTTGAACCTTGCATCATTTGGAAGTAGTCATGCTTTCAAACTAACCAAGGAAGATCTTGTTTTGTATTCCGCTAAGGTTATCCCTGGTAACGAATCTCGTGTGATGAAAATGCTAAACCGTGTATCAGAGATTGGATCAACTATAGTTATGGGAAAAAATGAAGGTCTGCACACATCTGGTCATGCATATCGTGGAGAATTGGAAGAAGTACTTAGAATAGTGAAGCCACAACATTTTCTTCCCATCCATGGAGAACTTTTGTTTCTGAAGGAACATGAATTACTAGGAAAATCAACTGGCATTCGGCACACTGCTGTCATTAAGAATGGAGAGATGCTTGGTGTTACACATTTGAGAAATAGAAAAGTCCTTTCTAATGGTTTCATTTCCCTAGGAAAAGAGAATTTACAGTTGAAATATAGTGATGGAGATAGAGCATTTGGTACATCAAGTGAACTCTTCATTGATGAAAGAATGAGAATTGCTTTAGATGGCATCATTGTTACTAGCATGGAAATATTTCGCCCTAAAATTTTAGGTAGTTTGGCTCCGAATACCTTAAAAGGGAAAATAAGGATTACCACAAGATGCTTATGGCTCGACAAAGGGAAGCTGATGGATGCACTCTACAAATCTGCCCATGCCGCTCTTTCAAGCTGCCCTGTAAATAGTCCCCTGGCTCACATAGAAAGAACTGTGTCTGAGGTATTGAGAAAGATGGTGAGGAAGTATAGTGGTAAACGACCTGAAGTTATTTCCATTGCCATAGAAAATCCTGCATCCGCTATAGCTGATGAGATAAACACAAAATTGTCTGGCAAAACCCATGCGGGTCTTGGAATATCAACATCAAAAAGAGCAGTGGATAGACATGAGAGAGGAAATCAGCCCACCTCACTGCAAGTTACAGATGATAGTATTGATAATGTAAGTGGAGCCGAGGGTTATTTATCTGAGGAAGACAACACTGCAAGTGGAGCTGATGGTGATATATCCGAGTCAGAGGATTCAGATGAATTTTGGAAACCATTCATTACACCATTACCGGTTGAGAAGCCATTTGGTGCTGACAATGCTTATGATTCACAAAAGGAGCATGAGTCCAATCAAAAGAAAGGTGATTCTAAGAACACTGATGAAACCAAGTCTGAAGAAACGTCTACCTCTGAACCCAAGTCTTCAAAATCAGTAAAGAGAAATAAATGGAAAACTGATGAAGTTAAGAAGCTGATTGGCATGCGTGAGGAGCTACGTGACAGATTTGAAATTGTGAAGGGTAGGATGGCCCTCTGGGAAGAGATATCTCAAAAACTGTCGGCTGATGGGATCAGCAGAAGTCCTGGACAGTGCAAATCTTTGTGGACATCTTTGGTAATTAAATATGAGGTGTGTTTCTTTTTTTAG 2538 0.4275 MAALTSLSLSLRPLSLRRKPTTSISASLSSLPGNTHESTTKAPRRRARRIEGPRKSMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWSHKIEALVITHGHEDHIGALPWVIPALDSNTPIFSSSFTKELINKRLKEHGIFVPSRLKVFRMRKKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGNVFDREALEELSKEGVTLMMSDSTNVLSPGRTISESVVADALLRHISASNGRVITTQFASNLHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASFGSSHAFKLTKEDLVLYSAKVIPGNESRVMKMLNRVSEIGSTIVMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVTHLRNRKVLSNGFISLGKENLQLKYSDGDRAFGTSSELFIDERMRIALDGIIVTSMEIFRPKILGSLAPNTLKGKIRITTRCLWLDKGKLMDALYKSAHAALSSCPVNSPLAHIERTVSEVLRKMVRKYSGKRPEVISIAIENPASAIADEINTKLSGKTHAGLGISTSKRAVDRHERGNQPTSLQVTDDSIDNVSGAEGYLSEEDNTASGADGDISESEDSDEFWKPFITPLPVEKPFGADNAYDSQKEHESNQKKGDSKNTDETKSEETSTSEPKSSKSVKRNKWKTDEVKKLIGMREELRDRFEIVKGRMALWEEISQKLSADGISRSPGQCKSLWTSLVIKYEVCFFF* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02792 845 Gene3D - 780 840 - -
Phac9g02792 845 MobiDBLite consensus disorder prediction 22 61 - -
Phac9g02792 845 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 434 471 IPR011108 -
Phac9g02792 845 ProSiteProfiles Myb-like domain profile. 772 836 IPR001005 -
Phac9g02792 845 SMART Lactamase_B_5a 89 286 IPR001279 -
Phac9g02792 845 MobiDBLite consensus disorder prediction 652 777 - -
Phac9g02792 845 MobiDBLite consensus disorder prediction 22 38 - -
Phac9g02792 845 Gene3D - 81 493 IPR036866 -
Phac9g02792 845 MobiDBLite consensus disorder prediction 39 61 - -
Phac9g02792 845 Pfam Metallo-beta-lactamase superfamily 90 234 IPR001279 -
Phac9g02792 845 SUPERFAMILY Metallo-hydrolase/oxidoreductase 77 491 IPR036866 -
Phac9g02792 845 Gene3D - 278 428 IPR042173 -
Phac9g02792 845 PANTHER RIBONUCLEASE J 1 841 - -
Phac9g02792 845 MobiDBLite consensus disorder prediction 672 686 - -
Phac9g02792 845 MobiDBLite consensus disorder prediction 736 777 - -
Phac9g02792 845 CDD GT1 778 840 - -
Phac9g02792 845 Pfam Myb/SANT-like DNA-binding domain 777 840 IPR044822 -
Phac9g02792 845 CDD RNaseJ_MBL-fold 80 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02792 Phac-Chr9 26719319 26729213 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02792 779 842 Trihelix Transcription Factor Family AT5G01380 40.625 8.63e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac9g02792 Lactamase_B 6.3e-09 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02792 - - gmx:100783850 1432.54