Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02790 ATGAAGATCATATTGGTGCGTTGCCTTGGGTCATCCCGGCATTGGATTCCAATACACCAATTTTTTCATCTTCATTTACAAAGGAGACTCAAAGTATTTAGAATGAGGAAGAAGTTTGTGGCTGGGCCATTTGAGATAGAACCTATTAGGGTGACCCATTCTATTCCTGATTGTTGTGGACTAGTTCTTCGCTGTTCTGATGGTACTATTCTTCACACTGGGGACTGGAAGATTGATGAGACACCACTAGATGGGAATGTTTTTGATCGTGAAGCTTTAGAGGAACTCTCTAAAGAGGGAGTAACATTGATGATGAGTGATTCAACAAATGTACTCTCACCTGGTAGGACAATCAGTGAATCAGTAGTGGCAGATGCATTGTTGAGACATATTTCAGCTTCTAATGGAAGGGTCATTACCACCCAATTTGCATCAAATTTACATCGGCTCGGAAGTGTGAAAGCTGCTGCTGATTTAACTGGCAGAAAGTTGGTATTTGTTGGCATGTCCTTAAGGACATATTTAGATGCAGCTTGGAAGGATGGAAAGGCACCAATTGATCCATCCACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCTCCAAAGGATCTGCTAATTGTAACAACAGGTTCTCAAGCAGAACCTCGTGCTGCCTTGAACCTTGCATCATTTGGAAGTAGTCATGCTTTCAAACTAACCAAGGAAGATCTTGTTTTGTATTCCGCTAAGGTTATCCCTGGTAACGAATCTCGTGTGATGAAAATGCTAAACCGTGTATCAGAGATTGGATCAACTATAGTTATGGGAAAAAATGAAGGTCTGCACACATCTGGTCATGCATATCGTGGAGAATTGGAAGAAGTACTTAGAATAGTGAAGCCACAACATTTTCTTCCCATCCATGGAGAACTTTTGTTTCTGAAGGAACATGAATTACTAGGAAAATCAACTGGCATTCGGCACACTGCTGTCATTAAGAATGGAGAGATGCTTGGTGTTACACATTTGAGAAATAGAAAAGTCCTTTCTAATGGTTTCATTTCCCTAGGAAAAGAGAATTTACAGTTGAAATATAGTGATGGAGATAGAGCATTTGGTACATCAAGTGAACTCTTCATTGATGAAAGAATGAGAATTGCTTTAGATGGCATCATTGTTACTAGCATGGAAATATTTCGCCCTAAAATTTTAGGTAGTTTGGCTCCGAATACCTTAAAAGGGAAAATAAGGATTACCACAAGATGCTTATGGCTCGACAAAGGGAAGCTGATGGATGCACTCTACAAATCTGCCCATGCCGCTCTTTCAAGCTGCCCTGTAAATAGTCCCCTGGCTCACATAGAAAGAACTGTGTCTGAGGTATTGAGAAAGATGGTGAGGAAGTATAGTGGTAAACGACCTGAAGTTATTTCCATTGCCATAGAAAATCCTGCATCCGCTATAGCTGATGAGATAAACACAAAATTGTCTGGCAAAACCCATGCGGGTCTTGGAATATCAACATCAAAAAGAGCAGTGGATAGACATGAGAGAGGAAATCAGCCCACCTCACTGCAAGTTACAGATGATAGTATTGATAATGTAAGTGGAGCCGAGGGTTATTTATCTGAGGAAGACAACACTGCAAGTGGAGCTGATGGTGATATATCCGAGTCAGAGGATTCAGATGAATTTTGGAAACCATTCATTACACCATTACCGGTTGAGAAGCCATTTGGTGCTGACAATGCTTATGATTCACAAAAGGAGCATGAGTCCAATCAAAAGAAAGGTGATTCTAAGAACACTGATGAAACCAAGTCTGAAGAAACGTCTACCTCTGAACCCAAGTCTTCAAAATCAGTAAAGAGAAATAAATGGAAAACTGATGAAGTTAAGAAGCTGATTGGCATGCGTGAGGAGCTACGTGACAGATTTGAAATTGTGAAGGGTAGGATGGCCCTCTGGGAAGAGATATCTCAAAAACTGTCGGCTGATGGGATCAGCAGAAGTCCTGGACAGTGCAAATCTTTGTGGACATCTTTGGTAATTAAATATGAGGGGATCAAGAATGAGAAGGATAGCAAGAAAAGTTGGCCATATATAGAGGACATGGAAAGGATAATGTCTGATAAAGAAGCTCCTGCAACAAAATGA 2139 0.4067 MKIILVRCLGSSRHWIPIHQFFHLHLQRRLKVFRMRKKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGNVFDREALEELSKEGVTLMMSDSTNVLSPGRTISESVVADALLRHISASNGRVITTQFASNLHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASFGSSHAFKLTKEDLVLYSAKVIPGNESRVMKMLNRVSEIGSTIVMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVTHLRNRKVLSNGFISLGKENLQLKYSDGDRAFGTSSELFIDERMRIALDGIIVTSMEIFRPKILGSLAPNTLKGKIRITTRCLWLDKGKLMDALYKSAHAALSSCPVNSPLAHIERTVSEVLRKMVRKYSGKRPEVISIAIENPASAIADEINTKLSGKTHAGLGISTSKRAVDRHERGNQPTSLQVTDDSIDNVSGAEGYLSEEDNTASGADGDISESEDSDEFWKPFITPLPVEKPFGADNAYDSQKEHESNQKKGDSKNTDETKSEETSTSEPKSSKSVKRNKWKTDEVKKLIGMREELRDRFEIVKGRMALWEEISQKLSADGISRSPGQCKSLWTSLVIKYEGIKNEKDSKKSWPYIEDMERIMSDKEAPATK* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02790 712 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 275 312 IPR011108 -
Phac9g02790 712 CDD GT1 619 684 - -
Phac9g02790 712 SUPERFAMILY Metallo-hydrolase/oxidoreductase 26 332 IPR036866 -
Phac9g02790 712 Gene3D - 24 334 IPR036866 -
Phac9g02790 712 Gene3D - 119 269 IPR042173 -
Phac9g02790 712 MobiDBLite consensus disorder prediction 577 620 - -
Phac9g02790 712 Pfam Myb/SANT-like DNA-binding domain 618 702 IPR044822 -
Phac9g02790 712 PANTHER RIBONUCLEASE J 24 712 - -
Phac9g02790 712 ProSiteProfiles Myb-like domain profile. 613 677 IPR001005 -
Phac9g02790 712 MobiDBLite consensus disorder prediction 513 527 - -
Phac9g02790 712 MobiDBLite consensus disorder prediction 493 620 - -
Phac9g02790 712 Gene3D - 621 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02790 Phac-Chr9 26719319 26729213 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02790 620 706 Trihelix Transcription Factor Family AT2G38250 34.831 7.61e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac9g02790 Myb_DNA-bind_4 2.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02790 - - gmx:100783850 1179.85