Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02787 ATGAAGATCATATTGGTCATCCCGGCATTGGATTCCAATACACCAATTTTTTCATCTTCATTTACAAAGGAGCTTATAAACAAACGTTTGAAGGAACATGGTATTTTTGTTCCATCTAGACTCAAAGTATTTAGAATGAGGAAGAAGTTTGTGGCTGGGCCATTTGAGATAGAACCTATTAGGGTGACCCATTCTATTCCTGATTGTTGTGGACTAGTTCTTCGCTGTTCTGATGGTACTATTCTTCACACTGGGGACTGGAAGATTGATGAGACACCACTAGATGGGAATGTTTTTGATCGTGAAGCTTTAGAGGAACTCTCTAAAGAGGGAGTAACATTGATGATGAGTGATTCAACAAATGTACTCTCACCTGGTAGGACAATCAGTGAATCAGTAGTGGCAGATGCATTGTTGAGACATATTTCAGCTTCTAATGGAAGGGTCATTACCACCCAATTTGCATCAAATTTACATCGGCTCGGAAGTGTGAAAGCTGCTGCTGATTTAACTGGCAGAAAGTTGGTATTTGTTGGCATGTCCTTAAGGACATATTTAGATGCAGCTTGGAAGGATGGAAAGGCACCAATTGATCCATCCACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCTCCAAAGGATCTGCTAATTGTAACAACAGGTTCTCAAGCAGAACCTCGTGCTGCCTTGAACCTTGCATCATTTGGAAGTAGTCATGCTTTCAAACTAACCAAGGAAGATCTTGTTTTGTATTCCGCTAAGGTTATCCCTGGTAACGAATCTCGTGTGATGAAAATGCTAAACCGTGTATCAGAGATTGGATCAACTATAGTTATGGGAAAAAATGAAGGTCTGCACACATCTGGTCATGCATATCGTGGAGAATTGGAAGAAGTACTTAGAATAGTGAAGCCACAACATTTTCTTCCCATCCATGGAGAACTTTTGTTTCTGAAGGAACATGAATTACTAGGAAAATCAACTGGCATTCGGCACACTGCTGTCATTAAGAATGGAGAGATGCTTGGTGTTACACATTTGAGAAATAGAAAAGTCCTTTCTAATGGTTTCATTTCCCTAGGAAAAGAGAATTTACAGTTGAAATATAGTGATGGAGATAGAGCATTTGGTACATCAAGTGAACTCTTCATTGATGAAAGAATGAGAATTGCTTTAGATGGCATCATTGTTACTAGCATGGAAATATTTCGCCCTAAAATTTTAGGTAGTTTGGCTCCGAATACCTTAAAAGGGAAAATAAGGATTACCACAAGATGCTTATGGCTCGACAAAGGGAAGCTGATGGATGCACTCTACAAATCTGCCCATGCCGCTCTTTCAAGCTGCCCTGTAAATAGTCCCCTGGCTCACATAGAAAGAACTGTGTCTGAGGTATTGAGAAAGATGGTGAGGAAGTATAGTGGTAAACGACCTGAAGTTATTTCCATTGCCATAGAAAATCCTGCATCCGCTATAGCTGATGAGATAAACACAAAATTGTCTGGCAAAACCCATGCGGGTCTTGGAATATCAACATCAAAAAGAGCAGTGGATAGACATGAGAGAGGAAATCAGCCCACCTCACTGCAAGTTACAGATGATAGTATTGATAATGTAAGTGGAGCCGAGGGTTATTTATCTGAGGAAGACAACACTGCAAGTGGAGCTGATGGTGATATATCCGAGTCAGAGGATTCAGATGAATTTTGGAAACCATTCATTACACCATTACCGGTTGAGAAGCCATTTGGTGCTGACAATGCTTATGATTCACAAAAGGAGCATGAGTCCAATCAAAAGAAAGGTGATTCTAAGAACACTGATGAAACCAAGTCTGAAGAAACGTCTACCTCTGAACCCAAGTCTTCAAAATCAGTAAAGAGAAATAAATGGAAAACTGATGAAGTTAAGAAGCTGATTGGCATGCGTGAGGAGCTACGTGACAGATTTGAAATTGTGAAGGGTAGGATGGCCCTCTGGGAAGAGATATCTCAAAAACTGTCGGCTGATGGGATCAGCAGAAGTCCTGGACAGTGCAAATCTTTGTGGACATCTTTGGTAATTAAATATGAGGGGATCAAGAATGAGAAGGATAGCAAGAAAAGTTGGCCATATATAGAGGACATGGAAAGGATAATGTCTGATAAAGAAGCTCCTGCAACAAAATGA 2172 0.4033 MKIILVIPALDSNTPIFSSSFTKELINKRLKEHGIFVPSRLKVFRMRKKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGNVFDREALEELSKEGVTLMMSDSTNVLSPGRTISESVVADALLRHISASNGRVITTQFASNLHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASFGSSHAFKLTKEDLVLYSAKVIPGNESRVMKMLNRVSEIGSTIVMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVTHLRNRKVLSNGFISLGKENLQLKYSDGDRAFGTSSELFIDERMRIALDGIIVTSMEIFRPKILGSLAPNTLKGKIRITTRCLWLDKGKLMDALYKSAHAALSSCPVNSPLAHIERTVSEVLRKMVRKYSGKRPEVISIAIENPASAIADEINTKLSGKTHAGLGISTSKRAVDRHERGNQPTSLQVTDDSIDNVSGAEGYLSEEDNTASGADGDISESEDSDEFWKPFITPLPVEKPFGADNAYDSQKEHESNQKKGDSKNTDETKSEETSTSEPKSSKSVKRNKWKTDEVKKLIGMREELRDRFEIVKGRMALWEEISQKLSADGISRSPGQCKSLWTSLVIKYEGIKNEKDSKKSWPYIEDMERIMSDKEAPATK* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02787 723 MobiDBLite consensus disorder prediction 524 538 - -
Phac9g02787 723 Gene3D - 245 362 IPR036866 -
Phac9g02787 723 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 286 323 IPR011108 -
Phac9g02787 723 Pfam Myb/SANT-like DNA-binding domain 629 713 IPR044822 -
Phac9g02787 723 MobiDBLite consensus disorder prediction 504 631 - -
Phac9g02787 723 Gene3D - 2 148 IPR036866 -
Phac9g02787 723 CDD GT1 630 695 - -
Phac9g02787 723 Gene3D - 632 692 - -
Phac9g02787 723 SUPERFAMILY Metallo-hydrolase/oxidoreductase 12 343 IPR036866 -
Phac9g02787 723 ProSiteProfiles Myb-like domain profile. 624 688 IPR001005 -
Phac9g02787 723 MobiDBLite consensus disorder prediction 588 631 - -
Phac9g02787 723 PANTHER RIBONUCLEASE J 4 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02787 Phac-Chr9 26719319 26729213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02787 631 717 Trihelix Transcription Factor Family AT2G38250 34.831 9.84e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac9g02787 Myb_DNA-bind_4 2.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02787 - - gmx:100783850 1238.4