Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02783 ATGGTTTCAACCAGACGCAACAGTGGATCTTTCTCTAACAACACCAGCAAGAGGGCTTCTTCTTCTGAAGACAAAACTCCCTCTCCTTCCCCCAAGCGCCAAAAGGTCGACAATGTTGCTGCCGCCTCGGAGAAACCGATGCCGCCGCCGGAAAATTCCAAGGATTTGGGCATGTCGGAGCCACCCCCTGATCCCGGAGAATGCGAATCTCGAGACGCTCAGATCGCCGACGCCGGCAATCTAGACGGCAAGGCCGAACCCACGCCGCCGATCGCCGATGGTTCTACACCGACTGTGGTTGCTGATAAACCTAGGGGTTCGTTCTCTTCTTGGGCTATATATCAGAAGCAAAACCCAAATTTCGAAGCTTCAGTTCCCTGGTGCAGACTCTTGTCTCAATCTGCGCAGAATCCGAATGTTTTAATTTGCACACCCAACTTTACTATCGGGTCTAGTAGGGGTTGCAATTTCCCGTTGAAGGATCAGACTATAAGTGGAAATTTGTGCAAGATCAAACACACGCAGCGCGAGGGAAGTGCCGTGGCCGTGCTAGAAAGTACGGGTAGCAAAGGATCGGTGGTAGTGAATGGCACGCTCGTCAAAAAGAGTACCAGCTGTGTGCTTAACTCGGGGGACGAGGTGGTTTTTGGTTTGATTGGGAATCATTCTTATATTTTTCAGCAAATAAATCCTGAAGTTGCAGTCAAGGCTGCAGAAATTCAGGGTGGTGTTGGCAAGTTTTTCCAGATTGAAAGGAGGGCTGGAGACCCTTCAGCTGTGGCTGGAGCTTCTATTCTGGCTTCTCTTTCTAGCCTCAGACCAGATCTTACAAGATGGAAGTCTCCTTCTCAGACTACCAGTAAACCTCATCAGGGTACTGATGTTCCTAGTCATTCTGTTCTCCCTGATGGTACAGAGTCTGGGCTCGATGGTCTGGAAGGCAACTCTGCTCCAAATATAGCGACAGATAAAGCTGCTGATGTTGGAGCAAGCGACAAGAATTTGCCAATGGATTGCGATTCAGATGATGCTGGCACAGAGGCAGGCAATGTATTCGAAGAAAGACATGGGACGAGGGATGCGCAAGCTGCATCGACTTCGGGTACTTCTTTACGCACTGCAGTTTTTAAAGAGGATGTTCTTGCTGCAATACTGGATAGGAAAGAAATAGAAGTGTCCTTTGACAACTTCCCTTACTACTTAAGTGAGAATACAAAAAATGTTCTAATTGCAGCTTGCTTTATACACCTGAAGCATAGAGAACATGCAAAGTACACCACCAATCTTACAACCATAAACCCTCGGATTCTACTTTCAGGACCTGCAGGGTCAGAAATATATCAGGAGATGTTGGCAAAAGCACTTGCGAAACACTTTGGAGCTAAATTGCTCATATTTGATAGCCATTTGCCTTTGGGTGGTTTAACATCCAAGGAAGCTGAGCTGCTCAAAGATGGATTTAATGCTGATAAGTCCTGTGGCTGTGCTAAACAAAGTCCTTTAACTACAGACTCGGCTAGGAGCATGGATCCACCAGCTAGTGAACCAGATACACCTAACTCCTCAAATGCACCTACTCCATATGGCTTTGAGTCTCAACTAAAGTTGGAAGCTGATAATGTACCATCTACGTCTGGGACAGCTAAAAATTGTGTGTTTAAACTGGGTGACAGGGTAAAATACAGTTCATCTTCTGGGGGGATATATCAGCTTCAGACAATTTCTGCAAGGGGTCCAGCTAATGGAAGTCGGGGGAAGGTTGTCTTACTTTTTGATGATAATCCCTTGTCAAAAATTGGTGTAAGATTTGATAAACCCATACCTGATGGAGTTGACCTTGGAGGTTGCTGTGAGGGTGGTCAAGGATTTTTCTGCCATGTGAATGATCTTCGGTTGGAAAACAGTGGCATTGAAGAACTTGACAAAGTACTCATTAATACATTATTTGAGGTTGTGGTTAGTGAGAGCAGAAATGAACCCTTCATTTTGTTCATGAAAGATGCAGAGAAGTCTATAGTAGGAAATGGAGATCCGTTTTCATTTAAAAGTAGGCTTGAAAATCTTCCGGACAATGTGGTGGTAATTGGTTCACACACTCACACTGACAGTCGCAAGGAGAAGTCACATCCTGGGGGTTTACTTTTTACAAAGTTTGGCAGTAATCAGACTGCTCTTCTTGATTTGGCTTTCCCGGATAGTTTTGGAAGATTGCATGACAGGGGAAAGGAGGTCCCAAAGCCAAACAAAACCTTAACTAAGCTTTTCCCGAATAAAGTGACAATTCACATGCCACAGGATGAAGCACTTCTAGCATCTTGGAAGCAGCAACTTGATCGAGATGTTGAGACTCTTAAAATTAAAGGAAATTTGCACAACTTACGATCTGTTTTGAGCCGCTGTGGGGTGGAATGTGAAGGACTTGAATCCTTGTGCACTAAGGATCAAACACTTAGTATTGAAAATGCAGAGAAGATTGTTGGTTGGGCTATAAGCCGTCATCTCATGCAGAATGCTGAAACTGATCCTGATGCAAAGCTTGTGTTGTCTTGTGAGAGCATCCAGTATGGAATTGGGATCTTACAGTCTATCCAGAATGAGTCAAAAAGCCTGAAAAAGTCTCTTAAGGATATTGTAACAGAAAATGAGTTTGAAAAGAGGCTTTTGGCTGATGTTATTCCACCTAACGACATTGATGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGACACATTGAAGGAATTGGTTATGCTTCCTTTACAGAGGCCCGAGTTATTTTGCAAAGGACAATTAACCAAGCCATGCAAGGGCATCCTTTTATTTGGCCCTCCTGGAACAGGCAAGACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCAAATTTCATCAACATTTCCATGTCAAGTATCACATCTAAGTGGTTTGGTGAGGGTGAAAAATATGTGAAAGCTGTTTTTTCCCTGGCAAGTAAAATTGCTCCTAGCGTGATATTTGTTGACGAAGTCGATAGCATGTTGGGCAGGAGGGAAAATCCTGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTAAATTGGGATGGCTTACGCACAAAGGATTCAGAGAGAGTTCTGGTGCTTGCAGCCACTAATAGGCCTTTTGACCTAGATGAAGCTGTCATAAGGAGGTTGCCTCGGAGGTTAATGGTAAATTTGCCAGATGCTCCAAATAGAGCAAAAATATTAAAAGTTATACTGGCAAAAGAAGACTTGTCTTCTGGTCTTGATTTGAATGCAATTGCAAGTATGACTGATGGATATTCCGGAAGTGATCTTAAGAATTTGTGTGTAACTGCTGCACACGGGCCCATTAAAGAGATATTAGAGAAGGAAAAAAAGGAACAGGCTGCTGCTCTAGCAGAAGGTAGAGCTGCTCCTGCAAAGAGTGGAAGTGAAGATATCCGATCTTTAAACATGGAAGATTTCAAACACGCACATCAACAGGTCTGTGCAAGCGTTTCGTCTGAATCCGTAAATATGACTGAGCTTCAACAATGGAATGAACTATACGGTGAAGGTGGTTCAAGAATAAAAAGAACACTAAGCTATTTCATGTGA 3615 0.4385 MVSTRRNSGSFSNNTSKRASSSEDKTPSPSPKRQKVDNVAAASEKPMPPPENSKDLGMSEPPPDPGECESRDAQIADAGNLDGKAEPTPPIADGSTPTVVADKPRGSFSSWAIYQKQNPNFEASVPWCRLLSQSAQNPNVLICTPNFTIGSSRGCNFPLKDQTISGNLCKIKHTQREGSAVAVLESTGSKGSVVVNGTLVKKSTSCVLNSGDEVVFGLIGNHSYIFQQINPEVAVKAAEIQGGVGKFFQIERRAGDPSAVAGASILASLSSLRPDLTRWKSPSQTTSKPHQGTDVPSHSVLPDGTESGLDGLEGNSAPNIATDKAADVGASDKNLPMDCDSDDAGTEAGNVFEERHGTRDAQAASTSGTSLRTAVFKEDVLAAILDRKEIEVSFDNFPYYLSENTKNVLIAACFIHLKHREHAKYTTNLTTINPRILLSGPAGSEIYQEMLAKALAKHFGAKLLIFDSHLPLGGLTSKEAELLKDGFNADKSCGCAKQSPLTTDSARSMDPPASEPDTPNSSNAPTPYGFESQLKLEADNVPSTSGTAKNCVFKLGDRVKYSSSSGGIYQLQTISARGPANGSRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGCCEGGQGFFCHVNDLRLENSGIEELDKVLINTLFEVVVSESRNEPFILFMKDAEKSIVGNGDPFSFKSRLENLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEALLASWKQQLDRDVETLKIKGNLHNLRSVLSRCGVECEGLESLCTKDQTLSIENAEKIVGWAISRHLMQNAETDPDAKLVLSCESIQYGIGILQSIQNESKSLKKSLKDIVTENEFEKRLLADVIPPNDIDVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDSERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSGLDLNAIASMTDGYSGSDLKNLCVTAAHGPIKEILEKEKKEQAAALAEGRAAPAKSGSEDIRSLNMEDFKHAHQQVCASVSSESVNMTELQQWNELYGEGGSRIKRTLSYFM* 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02783 1204 Pfam FHA domain 148 217 IPR000253 GO:0005515
Phac9g02783 1204 Gene3D - 126 234 - -
Phac9g02783 1204 Gene3D - 1072 1166 - -
Phac9g02783 1204 SMART AAA_5 936 1073 IPR003593 GO:0016887
Phac9g02783 1204 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 898 1074 - -
Phac9g02783 1204 MobiDBLite consensus disorder prediction 1 27 - -
Phac9g02783 1204 CDD FHA 129 227 - -
Phac9g02783 1204 Coils Coil 860 880 - -
Phac9g02783 1204 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 376 1203 - -
Phac9g02783 1204 MobiDBLite consensus disorder prediction 1 103 - -
Phac9g02783 1204 Pfam ATPase family associated with various cellular activities (AAA) 940 1069 IPR003959 GO:0005524|GO:0016887
Phac9g02783 1204 ProSitePatterns AAA-protein family signature. 1043 1062 IPR003960 GO:0005524|GO:0016887
Phac9g02783 1204 Pfam AAA+ lid domain 1094 1128 IPR041569 -
Phac9g02783 1204 SUPERFAMILY SMAD/FHA domain 119 226 IPR008984 GO:0005515
Phac9g02783 1204 MobiDBLite consensus disorder prediction 498 529 - -
Phac9g02783 1204 Gene3D - 898 1179 IPR027417 -
Phac9g02783 1204 MobiDBLite consensus disorder prediction 276 300 - -
Phac9g02783 1204 MobiDBLite consensus disorder prediction 276 347 - -
Phac9g02783 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 898 1178 IPR027417 -
Phac9g02783 1204 CDD RecA-like_ATAD1 903 1069 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02783 Phac-Chr9 26680405 26691930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02783 935 1141 Calmodulin-binding Proteins AT3G56690 35.714 5.16e-30 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02783 - - gmx:100780098 2107.03