Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02782 ATGGTTTCAACCAGACGCAACAGTGGATCTTTCTCTAACAACACCAGCAAGAGGGCTTCTTCTTCTGAAGACAAAACTCCCTCTCCTTCCCCCAAGCGCCAAAAGGTCGACAATGTTGCTGCCGCCTCGGAGAAACCGATGCCGCCGCCGGAAAATTCCAAGGATTTGGGCATGTCGGAGCCACCCCCTGATCCCGGAGAATGCGAATCTCGAGACGCTCAGATCGCCGACGCCGGCAATCTAGACGGCAAGGCCGAACCCACGCCGCCGATCGCCGATGGTTCTACACCGACTGTGGTTGCTGATAAACCTAGGGGTTCGTTCTCTTCTTGGGCTATATATCAGAAGCAAAACCCAAATTTCGAAGCTTCAGTTCCCTGGTGCAGACTCTTGTCTCAATCTGCGCAGAATCCGAATGTTTTAATTTGCACACCCAACTTTACTATCGGGTCTAGTAGGGGTTGCAATTTCCCGTTGAAGGATCAGACTATAAGTGGAAATTTGTGCAAGATCAAACACACGCAGCGCGAGGGAAGTGCCGTGGCCGTGCTAGAAAGTACGGGTAGCAAAGGATCGGTGGTAGTGAATGGCACGCTCGTCAAAAAGAGTACCAGCTGTGTGCTTAACTCGGGGGACGAGGTGGTTTTTGGTTTGATTGGGAATCATTCTTATATTTTTCAGCAAATAAATCCTGAAGTTGCAGTCAAGGCTGCAGAAATTCAGGGTGGTGTTGGCAAGTTTTTCCAGATTGAAAGGAGGGCTGGAGACCCTTCAGCTGTGGCTGGAGCTTCTATTCTGGCTTCTCTTTCTAGCCTCAGACCAGATCTTACAAGATGGAAGTCTCCTTCTCAGACTACCAGTAAACCTCATCAGGGTACTGATGTTCCTAGTCATTCTGTTCTCCCTGATGGTACAGAGTCTGGGCTCGATGGTCTGGAAGGCAACTCTGCTCCAAATATAGCGACAGATAAAGCTGCTGATGTTGGAGCAAGCGACAAGAATTTGCCAATGGATTGCGATTCAGATGATGCTGGCACAGAGGCAGGCAATGTAAAAATCTCTGGGGTGAATGCTTTCCTAGGGCCTTTCTTCAGGATTCTAGCTGGATCTACTTGTAAAGTGAAATTGAGCAAAAGTATCTTTAAACAGGTATTCGAAGAAAGACATGGGACGAGGGATGCGCAAGCTGCATCGACTTCGGGTACTTCTTTACGCACTGCAGTTTTTAAAGAGGATGTTCTTGCTGCAATACTGGATAGGAAAGAAATAGAAGTGTCCTTTGACAACTTCCCTTACTACTTAAGTGAGAATACAAAAAATGTTCTAATTGCAGCTTGCTTTATACACCTGAAGCATAGAGAACATGCAAAGTACACCACCAATCTTACAACCATAAACCCTCGGATTCTACTTTCAGGACCTGCAGGGTCAGAAATATATCAGGAGATGTTGGCAAAAGCACTTGCGAAACACTTTGGAGCTAAATTGCTCATATTTGATAGCCATTTGCCTTTGGGTGGTTTAACATCCAAGGAAGCTGAGCTGCTCAAAGATGGATTTAATGCTGATAAGTCCTGTGGCTGTGCTAAACAAAGTCCTTTAACTACAGACTCGGCTAGGAGCATGGATCCACCAGCTAGTGAACCAGATACACCTAACTCCTCAAATGCACCTACTCCATATGGCTTTGAGTCTCAACTAAAGTTGGAAGCTGATAATGTACCATCTACGTCTGGGACAGCTAAAAATTGTGTGTTTAAACTGGGTGACAGGGTAAAATACAGTTCATCTTCTGGGGGGATATATCAGCTTCAGACAATTTCTGCAAGGGGTCCAGCTAATGGAAGTCGGGGGAAGGTTGTCTTACTTTTTGATGATAATCCCTTGTCAAAAATTGGTGTAAGATTTGATAAACCCATACCTGATGGAGTTGACCTTGGAGGTTGCTGTGAGGGTGGTCAAGGATTTTTCTGCCATGTGAATGATCTTCGGTTGGAAAACAGTGGCATTGAAGAACTTGACAAAGTACTCATTAATACATTATTTGAGGTTGTGGTTAGTGAGAGCAGAAATGAACCCTTCATTTTGTTCATGAAAGATGCAGAGAAGTCTATAGTAGGAAATGGAGATCCGTTTTCATTTAAAAGTAGGCTTGAAAATCTTCCGGACAATGTGGTGGTAATTGGTTCACACACTCACACTGACAGTCGCAAGGAGAAGTCACATCCTGGGGGTTTACTTTTTACAAAGTTTGGCAGTAATCAGACTGCTCTTCTTGATTTGGCTTTCCCGGATAGTTTTGGAAGATTGCATGACAGGGGAAAGGAGGTCCCAAAGCCAAACAAAACCTTAACTAAGCTTTTCCCGAATAAAGTGACAATTCACATGCCACAGGATGAAGCACTTCTAGCATCTTGGAAGCAGCAACTTGATCGAGATGTTGAGACTCTTAAAATTAAAGGAAATTTGCACAACTTACGATCTGTTTTGAGCCGCTGTGGGGTGGAATGTGAAGGACTTGAATCCTTGTGCACTAAGGATCAAACACTTAGTATTGAAAATGCAGAGAAGATTGTTGGTTGGGCTATAAGCCGTCATCTCATGCAGAATGCTGAAACTGATCCTGATGCAAAGCTTGTGTTGTCTTGTGAGAGCATCCAGTATGGAATTGGGATCTTACAGTCTATCCAGAATGAGTCAAAAAGCCTGAAAAAGTCTCTTAAGGATATTGTAACAGAAAATGAGTTTGAAAAGAGGCTTTTGGCTGATGTTATTCCACCTAACGACATTGATGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGACACATTGAAGGAATTGGTTATGCTTCCTTTACAGAGGCCCGAGTTATTTTGCAAAGGACAATTAACCAAGCCATGCAAGGGCATCCTTTTATTTGGCCCTCCTGGAACAGGCAAGACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCAAATTTCATCAACATTTCCATGTCAAGTATCACATCTAAGTGGTTTGGTGAGGGTGAAAAATATGTGAAAGCTGTTTTTTCCCTGGCAAGTAAAATTGCTCCTAGCGTGATATTTGTTGACGAAGTCGATAGCATGTTGGGCAGGAGGGAAAATCCTGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTAAATTGGGATGGCTTACGCACAAAGGATTCAGAGAGAGTTCTGGTGCTTGCAGCCACTAATAGGCCTTTTGACCTAGATGAAGCTGTCATAAGGAGGTTGCCTCGGAGGTTAATGGTAAATTTGCCAGATGCTCCAAATAGAGCAAAAATATTAAAAGTTATACTGGCAAAAGAAGACTTGTCTTCTGGTCTTGATTTGAATGCAATTGCAAGTATGACTGATGGATATTCCGGAAGTGATCTTAAGAATTTGTGTGTAACTGCTGCACACGGGCCCATTAAAGAGATATTAGAGAAGGAAAAAAAGGAACAGGCTGCTGCTCTAGCAGAAGGTAGAGCTGCTCCTGCAAAGAGTGGAAGTGAAGATATCCGATCTTTAAACATGGAAGATTTCAAACACGCACATCAACAGGTCTGTGCAAGCGTTTCGTCTGAATCCGTAAATATGACTGAGCTTCAACAATGGAATGAACTATACGGTGAAGGTGGTTCAAGAATAAAAAGAACACTAAGCTATTTCATGTGA 3714 0.437 MVSTRRNSGSFSNNTSKRASSSEDKTPSPSPKRQKVDNVAAASEKPMPPPENSKDLGMSEPPPDPGECESRDAQIADAGNLDGKAEPTPPIADGSTPTVVADKPRGSFSSWAIYQKQNPNFEASVPWCRLLSQSAQNPNVLICTPNFTIGSSRGCNFPLKDQTISGNLCKIKHTQREGSAVAVLESTGSKGSVVVNGTLVKKSTSCVLNSGDEVVFGLIGNHSYIFQQINPEVAVKAAEIQGGVGKFFQIERRAGDPSAVAGASILASLSSLRPDLTRWKSPSQTTSKPHQGTDVPSHSVLPDGTESGLDGLEGNSAPNIATDKAADVGASDKNLPMDCDSDDAGTEAGNVKISGVNAFLGPFFRILAGSTCKVKLSKSIFKQVFEERHGTRDAQAASTSGTSLRTAVFKEDVLAAILDRKEIEVSFDNFPYYLSENTKNVLIAACFIHLKHREHAKYTTNLTTINPRILLSGPAGSEIYQEMLAKALAKHFGAKLLIFDSHLPLGGLTSKEAELLKDGFNADKSCGCAKQSPLTTDSARSMDPPASEPDTPNSSNAPTPYGFESQLKLEADNVPSTSGTAKNCVFKLGDRVKYSSSSGGIYQLQTISARGPANGSRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGCCEGGQGFFCHVNDLRLENSGIEELDKVLINTLFEVVVSESRNEPFILFMKDAEKSIVGNGDPFSFKSRLENLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEALLASWKQQLDRDVETLKIKGNLHNLRSVLSRCGVECEGLESLCTKDQTLSIENAEKIVGWAISRHLMQNAETDPDAKLVLSCESIQYGIGILQSIQNESKSLKKSLKDIVTENEFEKRLLADVIPPNDIDVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDSERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSGLDLNAIASMTDGYSGSDLKNLCVTAAHGPIKEILEKEKKEQAAALAEGRAAPAKSGSEDIRSLNMEDFKHAHQQVCASVSSESVNMTELQQWNELYGEGGSRIKRTLSYFM* 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02782 1237 ProSitePatterns AAA-protein family signature. 1076 1095 IPR003960 GO:0005524|GO:0016887
Phac9g02782 1237 Pfam FHA domain 148 217 IPR000253 GO:0005515
Phac9g02782 1237 MobiDBLite consensus disorder prediction 1 27 - -
Phac9g02782 1237 Pfam AAA+ lid domain 1127 1161 IPR041569 -
Phac9g02782 1237 CDD FHA 129 227 - -
Phac9g02782 1237 Gene3D - 931 1212 IPR027417 -
Phac9g02782 1237 MobiDBLite consensus disorder prediction 1 103 - -
Phac9g02782 1237 SMART AAA_5 969 1106 IPR003593 GO:0016887
Phac9g02782 1237 MobiDBLite consensus disorder prediction 531 562 - -
Phac9g02782 1237 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 409 1236 - -
Phac9g02782 1237 CDD RecA-like_ATAD1 936 1102 - -
Phac9g02782 1237 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 931 1107 - -
Phac9g02782 1237 Pfam ATPase family associated with various cellular activities (AAA) 973 1102 IPR003959 GO:0005524|GO:0016887
Phac9g02782 1237 SUPERFAMILY SMAD/FHA domain 119 226 IPR008984 GO:0005515
Phac9g02782 1237 MobiDBLite consensus disorder prediction 276 300 - -
Phac9g02782 1237 Coils Coil 893 913 - -
Phac9g02782 1237 MobiDBLite consensus disorder prediction 276 320 - -
Phac9g02782 1237 Gene3D - 1105 1199 - -
Phac9g02782 1237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 931 1211 IPR027417 -
Phac9g02782 1237 Gene3D - 126 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02782 Phac-Chr9 26680405 26691930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02782 968 1174 Calmodulin-binding Proteins AT3G56690 35.714 5.33e-30 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02782 - - gmx:100780098 2182.53