Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02772 ATGACACGCGGGCTCAGACTCTTCCAATCCCAGCCGGTGGCCTCACCGGAAGCCGCCGCCGCCGTCAAGTTCCACTTCGTGAAGATCCTAACGGCACTCCTCTTCGCGCTCATTTGCGCGCTTCCGTCTGGCTCCGTCGGCCACCAGCTTCCGTCTGGCTCCGTCGGCCACGACCTTCCGTCTGGCTCCGTCGGCCACGACCTTCCGCTCTCGCTCCGTCGGCCACCAACTTCCGTCGGCCGCGGTGGATCCTCATCTGTGCTGGTGAACAAGGGTCTGGAGAAGAGAGTGGTGAACTCGCTTCTGAAGTTGACTTACGCTTTAGAAGGTGATCGGTGCAACTGGTCGGTGTGCCCGATCTGCCTAACAGAGTTTGCCGAAGGCGACGAGGTTCGCGTGCTGCCGCAGTGTGGGCACGGGTTCCACGTAGCGTGTGTGGACACGTGGCTCTCCTTGCACTCCTCGTGCCCCTCTTGCCGCGCGCTCTTCGCCGTCGCCCACTGCCAAAAGTGCGACCACTTCTCGACAGTCGCCGCCGAAACAAGCGAACTAAAGGCAAAGCGCGTGGCGGCTGCAATAGCAATTGTAACAAGAATGCCGATAATAATATGA 612 0.6062 MTRGLRLFQSQPVASPEAAAAVKFHFVKILTALLFALICALPSGSVGHQLPSGSVGHDLPSGSVGHDLPLSLRRPPTSVGRGGSSSVLVNKGLEKRVVNSLLKLTYALEGDRCNWSVCPICLTEFAEGDEVRVLPQCGHGFHVACVDTWLSLHSSCPSCRALFAVAHCQKCDHFSTVAAETSELKAKRVAAAIAIVTRMPIII* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02772 203 CDD RING-H2_EL5-like 118 160 - -
Phac9g02772 203 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 164 IPR013083 -
Phac9g02772 203 ProSiteProfiles Zinc finger RING-type profile. 118 160 IPR001841 -
Phac9g02772 203 SUPERFAMILY RING/U-box 111 165 - -
Phac9g02772 203 Pfam Ring finger domain 118 160 IPR001841 -
Phac9g02772 203 SMART ring_2 118 159 IPR001841 -
Phac9g02772 203 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 17 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02772 Phac-Chr9 26604373 26605024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02772 5 171 C3H Transcription Factor Family AT1G20823 44.509 2.24e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02772 - - gmx:100813341 183.726