Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02744 ATGGACTGGAATTTGAAAGCAGCTTCTTGGGATTTGGTGGATGTGGATAAGGCTTCCATACCCAACATAGACTCAATGGAGGAGCATAACAGATTTGGAGTTTATAGAATGGAGGGGGAGTTTTCTGTTGACTTGAAGCTTGGTCATGTGGGGAATTCTGGCACTGAATCAGCGTTAGCCAAGTCCAAAGACGTTGCTGCTGGTGCTGGAGTCTCCAAAGTGGCATCCTCACCTTCAGGGTCTTCTAAGAGAGCTAGAGCCATTAACAGCACAACACTGACTGTTTCATGCCTTGTGGACGGGTGCAATTCAGATCTTAGCAACTGTAGAGATTACCATAGGCGACATAAGGTGTGTGAACTCCATTCCAAGTCCCCAGAGGTCACAATCGGTGGCCTCAAGCAAAGGTTCTGCCAGCAATGTAGCAGGTTCCATTCGCTGGAGCAATTTGATGAGAGAAAAAGAAGCTGCAGAAAACGTTTAGACGGACACAACAGACGGAGAAGAAAGCCTCAGCCAGAACCTCACACGCGACCTGGTAGTTTTTTATCGAATTACCAAGGTACTCAATTGCTACCCTTCTCAAATCCACACGTGTATCATTCCAGTGCCATGATGAGCCCCCCATGGAATGGAGGACTTGTGACTTCCTCTGCAGATGCTAGGTTGCACAACCAGCACCACCATCAAGTGCACTTGGTGGATAAACAAGACCTTTTTCTTGGATCTTCGCACAAAGAAGGGAAGCAATTGGCATTCGTACACGGTAACCATCCCTCCACAGGTGCACTCAGCAACCAAACCCTTCCCTTTCCCTCTCCTTCTGTGTGCCACACGCTTCTCAGGACCAGCCCTTTATCAGAAACTTGTGGAGTGAGAAGCAAAATGTTCTGTGAAAGCTTAACAACAACAAATTCGGTGCATGACACTCCTTGTGCTCTCTCTCTTCTGTCATCATCACAGACGCACACACCTGGGAATGGTTTGAACCAAATGGTGCAGCCTCCCTCGATGTCCCTGATGCAGCCCTTAGGCCTGAGCCTGCAGGATAACAGCAACTTAGAGTCTGTGGAGCGAGTGTTGGTTCCCAATGACAGTGACCATTGTTCCTCCATGTATAGCCTGGGTTCTGATGGATCTCACTGCAATGAAGCCCCTCAACTGTTTCCCTTTCAATGGGAATAG 1185 0.4827 MDWNLKAASWDLVDVDKASIPNIDSMEEHNRFGVYRMEGEFSVDLKLGHVGNSGTESALAKSKDVAAGAGVSKVASSPSGSSKRARAINSTTLTVSCLVDGCNSDLSNCRDYHRRHKVCELHSKSPEVTIGGLKQRFCQQCSRFHSLEQFDERKRSCRKRLDGHNRRRRKPQPEPHTRPGSFLSNYQGTQLLPFSNPHVYHSSAMMSPPWNGGLVTSSADARLHNQHHHQVHLVDKQDLFLGSSHKEGKQLAFVHGNHPSTGALSNQTLPFPSPSVCHTLLRTSPLSETCGVRSKMFCESLTTTNSVHDTPCALSLLSSSQTHTPGNGLNQMVQPPSMSLMQPLGLSLQDNSNLESVERVLVPNDSDHCSSMYSLGSDGSHCNEAPQLFPFQWE* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02744 394 FunFam Squamosa promoter-binding-like protein 14 88 158 - -
Phac9g02744 394 ProSiteProfiles Zinc finger SBP-type profile. 94 171 IPR004333 GO:0003677
Phac9g02744 394 SUPERFAMILY SBT domain 95 176 IPR036893 GO:0003677|GO:0005634
Phac9g02744 394 MobiDBLite consensus disorder prediction 158 186 - -
Phac9g02744 394 MobiDBLite consensus disorder prediction 159 173 - -
Phac9g02744 394 Pfam SBP domain 97 170 IPR004333 GO:0003677
Phac9g02744 394 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 56 381 IPR044817 GO:0003677
Phac9g02744 394 Gene3D - 89 158 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02744 Phac-Chr9 26363096 26366391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02744 1 394 SBP-box Gene Family AT5G50670 40.098 1.25e-72 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Phac9g02744 SBP 3.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02744 - - gmx:100787407 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02744 9 26363096 26366391 Phac9g02744 9 26363096 26366391 ECH