Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02741 ATGGAGGAGCATAACAGATTTGGAGTTTATAGAATGGAGGGGGAGTTTTCTGTTGACTTGAAGCTTGGTCATGTGGGGAATTCTGGCACTGAATCAGCGTTAGCCAAGTCCAAAGACGTTGCTGCTGGTGCTGGAGTCTCCAAAGTGGCATCCTCACCTTCAGGGTCTTCTAAGAGAGCTAGAGCCATTAACAGCACAACACTGACTGTTTCATGCCTTGTGGACGGGTGCAATTCAGATCTTAGCAACTGTAGAGATTACCATAGGCGACATAAGGTGTGTGAACTCCATTCCAAGTCCCCAGAGGTCACAATCGGTGGCCTCAAGCAAAGGTTCTGCCAGCAATGTAGCAGGTTCCATTCGCTGGAGCAATTTGATGAGAGAAAAAGAAGCTGCAGAAAACGTTTAGACGGACACAACAGACGGAGAAGAAAGCCTCAGCCAGAACCTCACACGCGACCTGGTAGTTTTTTATCGAATTACCAAGGTAAGCTTTCTGGTTGTAGTTGTTGTTGTTCTACTACCACATTATCTGAATGGACCCATGTGCATATATGCGTGGACTTCATGCAGGTAATAGCTAGAGATACATATCGCATAGGTACACGAGTCTCTCAAAAGAGTAAGAAGTTTCATGTGGAAACAATGCACTTAGCTAAATGA 663 0.454 MEEHNRFGVYRMEGEFSVDLKLGHVGNSGTESALAKSKDVAAGAGVSKVASSPSGSSKRARAINSTTLTVSCLVDGCNSDLSNCRDYHRRHKVCELHSKSPEVTIGGLKQRFCQQCSRFHSLEQFDERKRSCRKRLDGHNRRRRKPQPEPHTRPGSFLSNYQGKLSGCSCCCSTTTLSEWTHVHICVDFMQVIARDTYRIGTRVSQKSKKFHVETMHLAK* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02741 220 Gene3D - 64 133 IPR036893 GO:0003677|GO:0005634
Phac9g02741 220 MobiDBLite consensus disorder prediction 134 148 - -
Phac9g02741 220 SUPERFAMILY SBT domain 70 151 IPR036893 GO:0003677|GO:0005634
Phac9g02741 220 Pfam SBP domain 72 145 IPR004333 GO:0003677
Phac9g02741 220 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 40 149 IPR044817 GO:0003677
Phac9g02741 220 MobiDBLite consensus disorder prediction 133 157 - -
Phac9g02741 220 ProSiteProfiles Zinc finger SBP-type profile. 69 146 IPR004333 GO:0003677
Phac9g02741 220 FunFam Squamosa promoter-binding-like protein 14 63 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02741 Phac-Chr9 26361831 26366391 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02741 8 187 SBP-box Gene Family AT5G50670 49.479 7.15e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Phac9g02741 SBP 1.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02741 - - gmx:100787407 285.419