Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02724 ATGGCAGCTTTTTCATACCAATACCATCCTTTTCTGGTTGATCCTGCATTCTTCCCCACCAACATGAACACCCCTTCTTCTCCTCCTCCTCCCCAGTTTCACCTCCCTCAGGAAACATCTTTCAATGTCACAAACCAGGAGACTAGCTGTGTTGACCAAAGCTCCAAGATCACCATCAGTGACAATGAGCCTTCTGTCACTAAAAACCTTAGCCCTCAGTCCTCTGTGGTGGTGGACAAGCTTGAAACCGGCGAGCAGGTCACTCAGAAGGTGCACACTCCTGTGGAGAAGAAAAGGAGAACCAGAAATGGATCTTCCTTGACTAGTAACACTCAATCCAAGGATACTGCAGCAGAAGGAAGAACCAAGAAACAAAGAAAGAACAATGGTGGGGTGAAAGAAGAGGACAAGGCAAAAGTAGAGAAGAAGGAGCAGAGAAAATGTCCTGAAGAGCCCCCAACAGGCTATATCCACGTCAGAGCAAGAAGGGGTCAGGCAACGGATAGCCACAGCCTTGCTGAGAGGGTGAGAAGAGAGAAGATAAGTGAAAGGATGAAGGTGTTGCAACGGCTTGTGCCAGGCTGTGATAAGGTGACTGGAAAGGCCCTTATGTTGGATGAAATAATCAATTATGTTCAGTCTTTACAGAATCAAGTTGAGTTCTTGTCAATGAAGCTTGCTTCCGTGAATCCCATGTTTTATGACTTGTCAACGGACATAGACACCCTCTTGGTTAGACCAGAGAAACTAAATAGCATGGCATCACCATCACCACTACCATGTGTGTCACATTGCAACAGCCCCAACCAAGCTACAACTTTTGCTGATACAACCACCATGACCCCCACCAACATCTTTCACAATGCTAGTGACTATCTTTTGGATAACTCAACTTCATTTTTTCTTCAAGGGCAGAGGTCAACTATGTTCTCTGAGGAGGATACCGGTAGTCATCTCTGGGACGCAGAGGACCAGCGACAAAAGTTTCTTCATCCATATGGATTCAGCAACAACTTATGTTCCTTTCATTAA 1032 0.4564 MAAFSYQYHPFLVDPAFFPTNMNTPSSPPPPQFHLPQETSFNVTNQETSCVDQSSKITISDNEPSVTKNLSPQSSVVVDKLETGEQVTQKVHTPVEKKRRTRNGSSLTSNTQSKDTAAEGRTKKQRKNNGGVKEEDKAKVEKKEQRKCPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDLSTDIDTLLVRPEKLNSMASPSPLPCVSHCNSPNQATTFADTTTMTPTNIFHNASDYLLDNSTSFFLQGQRSTMFSEEDTGSHLWDAEDQRQKFLHPYGFSNNLCSFH* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02724 343 MobiDBLite consensus disorder prediction 117 155 - -
Phac9g02724 343 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 165 215 IPR011598 GO:0046983
Phac9g02724 343 SMART finulus 171 221 IPR011598 GO:0046983
Phac9g02724 343 MobiDBLite consensus disorder prediction 53 90 - -
Phac9g02724 343 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 46 274 IPR024097 GO:0006355
Phac9g02724 343 Gene3D - 162 235 IPR036638 GO:0046983
Phac9g02724 343 Pfam Helix-loop-helix DNA-binding domain 169 216 IPR011598 GO:0046983
Phac9g02724 343 MobiDBLite consensus disorder prediction 53 155 - -
Phac9g02724 343 CDD bHLH_AtBPE_like 155 240 - -
Phac9g02724 343 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 163 232 IPR036638 GO:0046983
Phac9g02724 343 FunFam Basic helix-loop-helix transcription factor 162 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02724 Phac-Chr9 26100608 26103620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02724 1 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 47.674 9.50e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac9g02724 HLH 1.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02724 - - gmx:100806696 590.112