Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02716 ATGAAAGCAGCCCCAAACGTCCCACAGGCGAGTGCATTTCACGCTCCAAATCCTTCACATTACACACGCTCACTTTTTCGAGGCTCTTCAACAAAACCCTTTTTCCCTCAACGTTGTGAAGCGAAAGGAAAAACGGCGAAGATGAAAGATTCAGCGGAAACAGATCCTATCGCTGAGTCTCTCAACCTGCTGAGTACACTTCTGGACTCGGAACTACCCAGCGTCACAAACTTCAAAGGGAAATGGTCACTCGCCGGAGTCAAACTCACCCATCTCCAAACTCACCTCACCGATTTCTCCGCCGAGTTCCCCAACGCTTCCACCACCAATCCCCTCTCCCTCCACCTCCTCCACTCCATCTCCCACACGCTCCACGAGGCCGTTTTACTCGCCCGCACGTGTCAGCCCCAACACCTCCCCTACGGCAAGCTCAAAACCCAAAGCGACCTCGACTCCCTTCTTGCTACCCTCGACCGCCACGTCACTGACTGCGACATCCTCTTCCGCAGCGGCCTTCTCCTTGAAAGCGCCGCCGTTTCCACCTCCTCTAAAAGAGAAGCCATCCGCTCCGCATCGCGAAACCTAATCACCCGGTTGCAAATCGGGTCGCCCGAGTCCAAAACCTCCGCGATGGACACCCTATTGGGCCTCCTTCACGAAGACGACAAAAATGTTACCATTGCTGTTGCGCAGGGCGTCGTCCCCGTGCTCGTGCGCCTGCTCGATTCACCCTCCGACATGAAGGAGAAAACGGTCGCTGCCATCGCCAAAGTTTCCACAGTTGAAAGCGCCAAGACCGTGCTCCTCGCCGAGGGTTTACTCCTTCTCAACCACCTTCTCCGAGTACTGGATTCTGGAAGCGGATTCGCGATTGAGAAATCATGCATCGCGCTTCAAGCGCTGAGTCTCACCAAGGACAACGCCAGAGCAATTGGCTCGCGCGGCGGAATCTCGTCTCTGCTGGAGATTTGCCAGGCTGGCACCCCCGGCGCGCAGGCCTCCGCAGCCGCCGTGTTGCGCAACCTCGCCGCGTTCGCGGAGATTAGGGACAATTTCGCGGAGGAGAATGCGGTGGTGGTTTTAGTCGCCTTGGCTTCCTCCGGAACTGCTTCGGCTCGTGAGAACGCTATTGGGTGTTTGTCGAATTTGATTTCCGAGGCTGACTCGGACGGTTTTTCGAATTTGAGGGTTATGGTGGTTAAGGAAGGTGGGGTTGAGTGTTTGAAGAATTACTGGGACTCGGGTACTCCAATTCCCAGTCTTGAAGTTGCAGTGAAGATGTTGCGGCATTTGGCTGAGAGTGCTGCAATTGGGGAGGTTCTGATAGGTGAAGGGTTTGGTCAGAGGCTTGTGGGGGTGCTGAACTGTGAGGTGCTGGCAGTGAGGATTGCCGCGGCGAGGGCGGTTGACGCTATAGGGTTGAACAGTGGCAGGGCGAGGAAAGAGATGGGGGAATTAGGGTGCGTTTCGGGTTTGATTAAGATGTTGGATGGGAAAGGTGCAGAGGAGAAAGAGGTTTCTGCAATGGCATTGTCGGTGCTGCTGATGCACCCTGCGAATAGGAAGGTTTTCCGCAAGGATGAAAGAGGGGTTGTGAGTGCGGTTCATTTGTTGAACCCGTCGTTGCAAGGATTGGATAAGAAGTACCCTGTTTCGTTGCTCGCTTCGTTAGTGCATTCCAAGAGTTGCAGAAAGCAGATGGTAGCAGCAGGGGCTTGTGTATATACGCAGAAGCTTGTGGAGATGGATGTGCCGGGATCTAAGAAACTCTTGGAGAGTCTCGGGCGTGGAAAGATTTGGGGTGTTTTTTCAAGACCCTAG 1821 0.5448 MKAAPNVPQASAFHAPNPSHYTRSLFRGSSTKPFFPQRCEAKGKTAKMKDSAETDPIAESLNLLSTLLDSELPSVTNFKGKWSLAGVKLTHLQTHLTDFSAEFPNASTTNPLSLHLLHSISHTLHEAVLLARTCQPQHLPYGKLKTQSDLDSLLATLDRHVTDCDILFRSGLLLESAAVSTSSKREAIRSASRNLITRLQIGSPESKTSAMDTLLGLLHEDDKNVTIAVAQGVVPVLVRLLDSPSDMKEKTVAAIAKVSTVESAKTVLLAEGLLLLNHLLRVLDSGSGFAIEKSCIALQALSLTKDNARAIGSRGGISSLLEICQAGTPGAQASAAAVLRNLAAFAEIRDNFAEENAVVVLVALASSGTASARENAIGCLSNLISEADSDGFSNLRVMVVKEGGVECLKNYWDSGTPIPSLEVAVKMLRHLAESAAIGEVLIGEGFGQRLVGVLNCEVLAVRIAAARAVDAIGLNSGRARKEMGELGCVSGLIKMLDGKGAEEKEVSAMALSVLLMHPANRKVFRKDERGVVSAVHLLNPSLQGLDKKYPVSLLASLVHSKSCRKQMVAAGACVYTQKLVEMDVPGSKKLLESLGRGKIWGVFSRP* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02716 606 Gene3D - 460 590 IPR011989 -
Phac9g02716 606 Gene3D - 147 459 IPR011989 -
Phac9g02716 606 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 232 273 IPR000225 GO:0005515
Phac9g02716 606 MobiDBLite consensus disorder prediction 1 23 - -
Phac9g02716 606 SUPERFAMILY ARM repeat 194 537 IPR016024 -
Phac9g02716 606 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 53 604 - -
Phac9g02716 606 SMART arm_5 221 260 IPR000225 GO:0005515
Phac9g02716 606 SMART arm_5 304 344 IPR000225 GO:0005515
Phac9g02716 606 SMART arm_5 345 385 IPR000225 GO:0005515
Phac9g02716 606 SMART arm_5 475 516 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02716 Phac-Chr9 25948864 25951231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02716 205 417 U-box Gene Family AT2G23140 27.969 1.70e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02716 - - vum:124844092 956.822