Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02692 ATGATGTCCAGAATGAACAGCGTTGGTTGGATGGAGGAACGTGAAGACGAGAACAACTCCGCTTCTTGGGCCAGGAACAAGCCCAACGCCACCATCATAGCCACCGACACAACAACCACATCAAAACCAACAACCACAGCAGCAGCAGGTTTCGTGGAAAACAACAGTACCCGCGACGACTTAGCATCTCTCTGCGCCTTCAAACCCATGCTGGAACTGGACGACGAATGGTACATCAGCAGCCACCACCAGCATAACAACCACCACCCCCAAGACATGACCTTCTCCCCCACCTTCCCCGACTCCGACAACCTCCTCCTCCCCGCCGTAGACTCCTCCTCCTCCTCCTCCGTCTTCACAAACCTCGACCCTTCCTCCTCCCACCTCCACTACTTCCTCCCTCCCAAGCCTCCCACTCTCTCTTCCCTTCTCAACCCCTTCGATATCCCCTTTCTTGACCCTCAAGCTTCCTCATCCTTCCCGCTTCTTCCATCTGCCCATTTCCCCTCCGACACGCCTCCTCAGACCGCCACCGCCACCGCCTTCGCCGGCTTCCACAGCCTTGACGACGGCTCCTCCAAGCCTCTCTTTCACCAGCGCTCGAAGATTCTGCGGCCCCTGGAGTCCCTGACTCCCTCCGGGGCGCCACCCACGCTCTTTCAGAAGAGGGCGGCGCTGAGGAAGAACATGTCTGGTGGGGAAGGGAGTGAGAAGAAGAGAAAGGAGAGGGAGGAGGTGGTGGAGGATGTGAGTTTTGATGGGTCTGGGTTGAATTATGATTCCGATGATTTTACTGAGATTAATAACAATGGTGGTAAAGTGGATGAGGGTAGTGCTAAGAAGGGTGGGAACAGTTCCAATGCCAACAGCAGCGTGACTGGGTTGGATCAGAAAGGGAAGAGGAAGGGAATGCCTGCTAAGAATTTGATGGCAGAACGACGGCGTAGGAAGAAGCTCAATGATCGACTCTACATGCTTAGGTCCGTTGTTCCTAAGATTAGCAAAGTAAGTTTGAGTTCTTGCATCTCACTCACTCAGCCTTTCTCAAATTTTCAATTTTCAATTGTAGTTGGTTTGATTTGGAATGGATCTCTTTGA 1098 0.531 MMSRMNSVGWMEEREDENNSASWARNKPNATIIATDTTTTSKPTTTAAAGFVENNSTRDDLASLCAFKPMLELDDEWYISSHHQHNNHHPQDMTFSPTFPDSDNLLLPAVDSSSSSSVFTNLDPSSSHLHYFLPPKPPTLSSLLNPFDIPFLDPQASSSFPLLPSAHFPSDTPPQTATATAFAGFHSLDDGSSKPLFHQRSKILRPLESLTPSGAPPTLFQKRAALRKNMSGGEGSEKKRKEREEVVEDVSFDGSGLNYDSDDFTEINNNGGKVDEGSAKKGGNSSNANSSVTGLDQKGKRKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKVSLSSCISLTQPFSNFQFSIVVGLIWNGSL* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02692 365 MobiDBLite consensus disorder prediction 280 296 - -
Phac9g02692 365 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 300 340 IPR036638 GO:0046983
Phac9g02692 365 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 303 352 IPR011598 GO:0046983
Phac9g02692 365 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 134 340 - -
Phac9g02692 365 MobiDBLite consensus disorder prediction 232 250 - -
Phac9g02692 365 Pfam Helix-loop-helix DNA-binding domain 310 335 IPR011598 GO:0046983
Phac9g02692 365 MobiDBLite consensus disorder prediction 229 309 - -
Phac9g02692 365 MobiDBLite consensus disorder prediction 1 28 - -
Phac9g02692 365 Gene3D - 296 347 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02692 Phac-Chr9 25573612 25576744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02692 195 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G12860 50.327 3.51e-29 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac9g02692 HLH 0.00014 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02692 - - gmx:100217332 330.487