Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02691 ATGATGTCCAGAATGAACAGCGTTGGTTGGATGGAGGAACGTGAAGACGAGAACAACTCCGCTTCTTGGGCCAGGAACAAGCCCAACGCCACCATCATAGCCACCGACACAACAACCACATCAAAACCAACAACCACAGCAGCAGCAGGTTTCGTGGAAAACAACAGTACCCGCGACGACTTAGCATCTCTCTGCGCCTTCAAACCCATGCTGGAACTGGACGACGAATGGTACATCAGCAGCCACCACCAGCATAACAACCACCACCCCCAAGACATGACCTTCTCCCCCACCTTCCCCGACTCCGACAACCTCCTCCTCCCCGCCGTAGACTCCTCCTCCTCCTCCTCCGTCTTCACAAACCTCGACCCTTCCTCCTCCCACCTCCACTACTTCCTCCCTCCCAAGCCTCCCACTCTCTCTTCCCTTCTCAACCCCTTCGATATCCCCTTTCTTGACCCTCAAGCTTCCTCATCCTTCCCGCTTCTTCCATCTGCCCATTTCCCCTCCGACACGCCTCCTCAGACCGCCACCGCCACCGCCTTCGCCGGCTTCCACAGCCTTGACGACGGCTCCTCCAAGCCTCTCTTTCACCAGCGCTCGAAGATTCTGCGGCCCCTGGAGTCCCTGACTCCCTCCGGGGCGCCACCCACGCTCTTTCAGAAGAGGGCGGCGCTGAGGAAGAACATGTCTGGTGGGGAAGGGAGTGAGAAGAAGAGAAAGGAGAGGGAGGAGGTGGTGGAGGATGTGAGTTTTGATGGGTCTGGGTTGAATTATGATTCCGATGATTTTACTGAGATTAATAACAATGGTGGTAAAGTGGATGAGGGTAGTGCTAAGAAGGGTGGGAACAGTTCCAATGCCAACAGCAGCGTGACTGGGTTGGATCAGAAAGGGAAGAGGAAGGGAATGCCTGCTAAGAATTTGATGGCAGAACGACGGCGTAGGAAGAAGCTCAATGATCGACTCTACATGCTTAGGTCCGTTGTTCCTAAGATTAGCAAAATGGACAGGGCTTCAATTCTTGGGGATGCAATCGAGTATCTTAAGGAGCTTCTGCAAAGGATCAATGATCTTCATAACGAGTTGGAGTCTACATCGGCTGCTTCTTCCCTCACTCCTTCCTCCAATTTCCATCCCTTGACGCCTACTCCTCCCACCCTGCCTAGTCGTATCAAAGAAGAATTGTGCCCCACCTCATTGCCAAGCCCCAATGCTCAACCTGCTAGGGTTGAAGTTCGGCTACGCGAAGGAAGGGCTGTTAACATCCATATGTTTTGTGCCCGCAAGCCTGGTCTGTTGCTCTCAACCATGAGGGCTATGGATAACCTTGGATTAGACATTCAGCAGGCTGTTATCAGCTGCTTCAATGGATTTGCTATGGATATTTTTCGAGCCGAGCAATGCAAAGAAGGTCAGGATGTCCATCCGGAGCAGATCAAAGCAGTTCTCTTGGATTCAGCTGGCTACAGTGGCATGATGTAA 1485 0.5279 MMSRMNSVGWMEEREDENNSASWARNKPNATIIATDTTTTSKPTTTAAAGFVENNSTRDDLASLCAFKPMLELDDEWYISSHHQHNNHHPQDMTFSPTFPDSDNLLLPAVDSSSSSSVFTNLDPSSSHLHYFLPPKPPTLSSLLNPFDIPFLDPQASSSFPLLPSAHFPSDTPPQTATATAFAGFHSLDDGSSKPLFHQRSKILRPLESLTPSGAPPTLFQKRAALRKNMSGGEGSEKKRKEREEVVEDVSFDGSGLNYDSDDFTEINNNGGKVDEGSAKKGGNSSNANSSVTGLDQKGKRKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELESTSAASSLTPSSNFHPLTPTPPTLPSRIKEELCPTSLPSPNAQPARVEVRLREGRAVNIHMFCARKPGLLLSTMRAMDNLGLDIQQAVISCFNGFAMDIFRAEQCKEGQDVHPEQIKAVLLDSAGYSGMM* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02691 494 Coils Coil 342 369 - -
Phac9g02691 494 CDD bHLH_AtAMS_like 306 371 - -
Phac9g02691 494 FunFam BHLH transcription factor 299 367 - -
Phac9g02691 494 Pfam Helix-loop-helix DNA-binding domain 310 352 IPR011598 GO:0046983
Phac9g02691 494 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 145 490 - -
Phac9g02691 494 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 306 370 IPR036638 GO:0046983
Phac9g02691 494 MobiDBLite consensus disorder prediction 232 250 - -
Phac9g02691 494 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 303 352 IPR011598 GO:0046983
Phac9g02691 494 MobiDBLite consensus disorder prediction 280 296 - -
Phac9g02691 494 Gene3D - 297 368 IPR036638 GO:0046983
Phac9g02691 494 MobiDBLite consensus disorder prediction 229 315 - -
Phac9g02691 494 CDD ACT_UUR-ACR-like 423 483 - -
Phac9g02691 494 SMART finulus 309 358 IPR011598 GO:0046983
Phac9g02691 494 MobiDBLite consensus disorder prediction 1 28 - -
Phac9g02691 494 MobiDBLite consensus disorder prediction 300 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02691 Phac-Chr9 25573612 25576744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02691 67 467 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 50.328 7.78e-112 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac9g02691 HLH 1.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02691 - - gmx:100217332 603.979