Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac9g02690 | ATGGCATCATCCGAGGTGACGATGAAGGGAAATTGCTTGAACCATATCGACGGCGGAGCTTCGGAGGCTCAGTCGCCGGCCACGGCCAAAGACGCAGAAGCTGCACTTTTCAGGGAACTGTGGCACGCGTGTGCCGGTCCTCTTGTGACCGTGCCGCGCGAAGGAGAGCGCGTGTTTTATTTTCCTCAGGGACATATCGAGCAGGTTGAAGCGTCGACGAATCAGGTGGCGGACCAGCACATGCCCGTTTACGATCTCCCACCCAAGATCCTTTGTCGGGTCATCAACGTGCAGCTGAAGGCCGAGCCCGACACGGATGAGGTGTTCGCTCAGGTCACCTTGCTTCCGGAGCCAAATCAAAATGAGAATGACGTGGAGAAAGAGCCGCCACCGCCACCGCCTCCGCGGTTTCACGTCCATTCTTTCTGTAAAACCCTGACAGCGTCCGATACCAGTACCCATGGTGGGTTTTCCGTGCTGAGACGGCATGCTGATGAATGCCTTCCCCCTCTGGATATGTCGAAGCAGCCACCCACTCAGGAATTGGCAGCAAAGGATCTTCATGGGAACGAATGGCGATTTAAACATATCTTTCGGGGTCAACCCCGTAGACACTTGCTTCAGAGTGGTTGGAGTGTTTTTGTTAGTTCCAAAAGGCTTGTCGCTGGGGATGCGTTTATATTTCTTAGAGGTGAGAATGGGGAACTTCGAGTTGGTGTCAGGCGAGCAATGAGACAGCAGGGTAATGTTCCATCCTCAGTTATCTCCAGTCACAGCATGCATCTTGGGGTCCTTGCAACTGCTTGGCATGCCATCTTGACGGGGACAATCTTCACTGTCTATTACAAACCTAGGACTAGTCCAGCTGAATTCATTGTTCCGTATGATCAATATATGGAGTCTCTCAAAAACAGTTATAGCATCGGGATGCGGTTCAAAATGAGGTTTGAAGGAGAAGAGGCCCCAGAGCAGAGGTTTACTGGTACAATTGTTGGAATAGAAGATTCAGATCCCAACAGGTGGAGGGAATCTAAATGGAGATGCCTCAAGGTGAGATGGGATGAAACATCTAACACCCCTCGTCCTGAGAGGGTTTCCCCTTGGAAAATAGAGCCCGCTCTTGCGCCTCCGGCTCTAAATCCTCTTTCAATGCCCAGGCCTAAAAGGCCTCGGTCTAATGCAATTCCTCCATCCCCAGATTCTTCTGTCCTTACTCGAGAAGCATCATCTAAAGTAAGCATAGACCCTTCACCGGCAAATGGATTTCCAAGGGTCTTGCAAGGTCAAGAATTCTCGACCTTGAGAGGCAATTTTGCTGAAAGCATTGACTCTGATGCCGCTGAGAAATCTGTTGTTTGGCCGCCTGCTGCAGTAGATGATGAAAAGATTGATGTTTCTACGTCAAGGAGGTATGGGTCGGAGAGCTGGATGTCAATGGGAAGAAACGAGCCGACATATTCTGATCTTCTTTCAGGCTTTGGCGCCGGTGGGGATTCTTCTCATTCATCCTTCATGGATCAAATGAGCCCTGTTGCTTATCCCTCGAGAAAGCAATCGTCGGATCACGAAGGCAAACTTCACATGCCTCAGCCGTGGCCTGTAATGCCCTCTAGTCTTTCATTGAATATATTGGACTCTAATACAAAAGGTCCTGCACATGGTGGTGATCCAACTTACCAAGCTCGAGGGAATTTGAGGTACAGTGCATTTGGTGAATACCCTGCACTGCATGGTCATAAAGTTGAGCATTCACATGGAAACTTGATGCCGCCACCCCCACCTGCACCTGTCAATCAATATCAGAGTCCTTGTTCAAGAGAACTTATGTTAAAACCAGTGTCAGCAAAAACATTTGAGGCTGTGAAGTTAAAAGATGGTGACTGTAAGCTATTTGGCTTCTCACTTATCAGTGGCCCTATTGTACCAGAGCCTCCTGTATCGCAAAGAAATGTGAACGAACCTACTGGTCAGATGCATCTTACGCCACACCAACAAAGAACATCCGAAAATGATGAGAAGTCAGACCACTCAAAGGGCTCAAAAACTGCAGATGATCTAGTTGTTGATGACCATGATAGACCATTACAGGCTTCTCAGCTGCATGCGAAAGATGGTCAAGCCAAACCCCTCAGTAGTTCTGCTAGGAGTTGCACTAAAGTTCACAAGAAGGGCATTGCACTTGGTAGGTCAGTGGACCTCACAAAATACACTGGCTATGATGAATTAGTAGCTGAATTGGATCAGCTGTTTGAATTTGAGGGAGAATTATTGTCAACTAAAAAAGATTGGCTTATTGTCTATACGGATAATGAGGGTGATATGATGCTTGTAGGCGATGACCCGTGGCAGGAATTCTGTGCCATGGTTCGCAAAATTTACATCTACCCTAAAGAGGAGATCCAGAAAATGAGCCCGGGTACCTTGAGCTCAAAAAATGAAGAGAACCAGTCGGGTAGTGAAGGTGCAGATGCAAAAGATGTTAAATGTCTGCCGCCTCAAAAGTTCAATTATGAAAATGGACTTGACGCGTGA | 2532 | 0.4803 | MASSEVTMKGNCLNHIDGGASEAQSPATAKDAEAALFRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQHMPVYDLPPKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQNENDVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFKHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKNSYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPNRWRESKWRCLKVRWDETSNTPRPERVSPWKIEPALAPPALNPLSMPRPKRPRSNAIPPSPDSSVLTREASSKVSIDPSPANGFPRVLQGQEFSTLRGNFAESIDSDAAEKSVVWPPAAVDDEKIDVSTSRRYGSESWMSMGRNEPTYSDLLSGFGAGGDSSHSSFMDQMSPVAYPSRKQSSDHEGKLHMPQPWPVMPSSLSLNILDSNTKGPAHGGDPTYQARGNLRYSAFGEYPALHGHKVEHSHGNLMPPPPPAPVNQYQSPCSRELMLKPVSAKTFEAVKLKDGDCKLFGFSLISGPIVPEPPVSQRNVNEPTGQMHLTPHQQRTSENDEKSDHSKGSKTADDLVVDDHDRPLQASQLHAKDGQAKPLSSSARSCTKVHKKGIALGRSVDLTKYTGYDELVAELDQLFEFEGELLSTKKDWLIVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTLSSKNEENQSGSEGADAKDVKCLPPQKFNYENGLDA* | 844 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac9g02690 | 843 | MobiDBLite | consensus disorder prediction | 648 | 664 | - | - | |
Phac9g02690 | 843 | MobiDBLite | consensus disorder prediction | 395 | 416 | - | - | |
Phac9g02690 | 843 | FunFam | Auxin response factor | 305 | 377 | - | - | |
Phac9g02690 | 843 | SUPERFAMILY | DNA-binding pseudobarrel domain | 138 | 271 | IPR015300 | - | |
Phac9g02690 | 843 | ProSiteProfiles | PB1 domain profile. | 715 | 797 | IPR000270 | GO:0005515 | |
Phac9g02690 | 843 | SMART | B3_2 | 142 | 244 | IPR003340 | GO:0003677 | |
Phac9g02690 | 843 | MobiDBLite | consensus disorder prediction | 641 | 688 | - | - | |
Phac9g02690 | 843 | MobiDBLite | consensus disorder prediction | 665 | 688 | - | - | |
Phac9g02690 | 843 | FunFam | Auxin response factor | 710 | 804 | - | - | |
Phac9g02690 | 843 | ProSiteProfiles | B3 DNA-binding domain profile. | 142 | 244 | IPR003340 | GO:0003677 | |
Phac9g02690 | 843 | Gene3D | - | 139 | 244 | IPR015300 | - | |
Phac9g02690 | 843 | FunFam | Auxin response factor | 140 | 244 | - | - | |
Phac9g02690 | 843 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 35 | 804 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Phac9g02690 | 843 | MobiDBLite | consensus disorder prediction | 804 | 843 | - | - | |
Phac9g02690 | 843 | Pfam | Auxin response factor | 268 | 350 | IPR010525 | GO:0003677|GO:0005634|GO:0006355|GO:0009725 | |
Phac9g02690 | 843 | Gene3D | - | 711 | 804 | - | - | |
Phac9g02690 | 843 | CDD | B3_DNA | 140 | 242 | IPR003340 | GO:0003677 | |
Phac9g02690 | 843 | SUPERFAMILY | CAD & PB1 domains | 715 | 792 | - | - | |
Phac9g02690 | 843 | Pfam | B3 DNA binding domain | 142 | 243 | IPR003340 | GO:0003677 | |
Phac9g02690 | 843 | Gene3D | - | 305 | 375 | - | - | |
Phac9g02690 | 843 | MobiDBLite | consensus disorder prediction | 378 | 394 | - | - | |
Phac9g02690 | 843 | Pfam | AUX/IAA family | 704 | 802 | IPR033389 | - | |
Phac9g02690 | 843 | MobiDBLite | consensus disorder prediction | 376 | 423 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac9g02690 | Phac-Chr9 | 25567598 | 25573476 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac9g02690 | 1 | 828 | B3 DNA Binding Superfamily | AT5G62000 | 64.699 | 0.0 | 1080 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3-ARF | Phac9g02690 | AUX_IAA | 2.8e-12 | CL0072 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac9g02690 | - | - | gmx:100803498 | 1550.03 |