Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02689 ATGGTTTTCCAGGCCGAGCCCGACACGGATGAGGTGTTCGCTCAGGTCACCTTGCTTCCGGAGCCAAATCAAAATGAGAATGACGTGGAGAAAGAGCCGCCACCGCCACCGCCTCCGCGGTTTCACGTCCATTCTTTCTGTAAAACCCTGACAGCGTCCGATACCAGTACCCATGGTGGGTTTTCCGTGCTGAGACGGCATGCTGATGAATGCCTTCCCCCTCTGGATATGTCGAAGCAGCCACCCACTCAGGAATTGGCAGCAAAGGATCTTCATGGGAACGAATGGCGATTTAAACATATCTTTCGGGGTCAACCCCGTAGACACTTGCTTCAGAGTGGTTGGAGTGTTTTTGTTAGTTCCAAAAGGCTTGTCGCTGGGGATGCGTTTATATTTCTTAGAGGTGAGAATGGGGAACTTCGAGTTGGTGTCAGGCGAGCAATGAGACAGCAGGGTAATGTTCCATCCTCAGTTATCTCCAGTCACAGCATGCATCTTGGGGTCCTTGCAACTGCTTGGCATGCCATCTTGACGGGGACAATCTTCACTGTCTATTACAAACCTAGGACTAGTCCAGCTGAATTCATTGTTCCGTATGATCAATATATGGAGTCTCTCAAAAACAGTTATAGCATCGGGATGCGGTTCAAAATGAGGTTTGAAGGAGAAGAGGCCCCAGAGCAGAGGTTTACTGGTACAATTGTTGGAATAGAAGATTCAGATCCCAACAGGTGGAGGGAATCTAAATGGAGATGCCTCAAGGTGAGATGGGATGAAACATCTAACACCCCTCGTCCTGAGAGGGTTTCCCCTTGGAAAATAGAGCCCGCTCTTGCGCCTCCGGCTCTAAATCCTCTTTCAATGCCCAGGCCTAAAAGGCCTCGGTCTAATGCAATTCCTCCATCCCCAGATTCTTCTGTCCTTACTCGAGAAGCATCATCTAAAGTAAGCATAGACCCTTCACCGGCAAATGGATTTCCAAGGGTCTTGCAAGGTCAAGAATTCTCGACCTTGAGAGGCAATTTTGCTGAAAGCATTGACTCTGATGCCGCTGAGAAATCTGTTGTTTGGCCGCCTGCTGCAGTAGATGATGAAAAGATTGATGTTTCTACGTCAAGGAGGTATGGGTCGGAGAGCTGGATGTCAATGGGAAGAAACGAGCCGACATATTCTGATCTTCTTTCAGGCTTTGGCGCCGGTGGGGATTCTTCTCATTCATCCTTCATGGATCAAATGAGCCCTGTTGCTTATCCCTCGAGAAAGCAATCGTCGGATCACGAAGGCAAACTTCACATGCCTCAGCCGTGGCCTGTAATGCCCTCTAGTCTTTCATTGAATATATTGGACTCTAATACAAAAGGTCCTGCACATGGTGGTGATCCAACTTACCAAGCTCGAGGGAATTTGAGGTACAGTGCATTTGGTGAATACCCTGCACTGCATGGTCATAAAGTTGAGCATTCACATGGAAACTTGATGCCGCCACCCCCACCTGCACCTGTCAATCAATATCAGAGTCCTTGTTCAAGAGAACTTATGTTAAAACCAGTGTCAGCAAAAACATTTGAGGCTGTGAAGTTAAAAGATGGTGACTGTAAGCTATTTGGCTTCTCACTTATCAGTGGCCCTATTGTACCAGAGCCTCCTGTATCGCAAAGAAATGTGAACGAACCTACTGGTCAGATGCATCTTACGCCACACCAACAAAGAACATCCGAAAATGATGAGAAGTCAGACCACTCAAAGGGCTCAAAAACTGCAGATGATCTAGTTGTTGATGACCATGATAGACCATTACAGGCTTCTCAGCTGCATGCGAAAGATGGTCAAGCCAAACCCCTCAGTAGTTCTGCTAGGAGTTGCACTAAAGTTCACAAGAAGGGCATTGCACTTGGTAGGTCAGTGGACCTCACAAAATACACTGGCTATGATGAATTAGTAGCTGAATTGGATCAGCTGTTTGAATTTGAGGGAGAATTATTGTCAACTAAAAAAGATTGGCTTATTGTCTATACGGATAATGAGGGTGATATGATGCTTGTAGGCGATGACCCGTGGCAGGAATTCTGTGCCATGGTTCGCAAAATTTACATCTACCCTAAAGAGGAGATCCAGAAAATGAGCCCGGGTACCTTGAGCTCAAAAAATGAAGAGAACCAGTCGGGTAGTGAAGGTGCAGATGCAAAAGATGTTAAATGTCTGCCGCCTCAAAAGTTCAATTATGAAAATGGACTTGACGCGTGA 2244 0.4675 MVFQAEPDTDEVFAQVTLLPEPNQNENDVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFKHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKNSYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPNRWRESKWRCLKVRWDETSNTPRPERVSPWKIEPALAPPALNPLSMPRPKRPRSNAIPPSPDSSVLTREASSKVSIDPSPANGFPRVLQGQEFSTLRGNFAESIDSDAAEKSVVWPPAAVDDEKIDVSTSRRYGSESWMSMGRNEPTYSDLLSGFGAGGDSSHSSFMDQMSPVAYPSRKQSSDHEGKLHMPQPWPVMPSSLSLNILDSNTKGPAHGGDPTYQARGNLRYSAFGEYPALHGHKVEHSHGNLMPPPPPAPVNQYQSPCSRELMLKPVSAKTFEAVKLKDGDCKLFGFSLISGPIVPEPPVSQRNVNEPTGQMHLTPHQQRTSENDEKSDHSKGSKTADDLVVDDHDRPLQASQLHAKDGQAKPLSSSARSCTKVHKKGIALGRSVDLTKYTGYDELVAELDQLFEFEGELLSTKKDWLIVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTLSSKNEENQSGSEGADAKDVKCLPPQKFNYENGLDA* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02689 747 ProSiteProfiles B3 DNA-binding domain profile. 46 148 IPR003340 GO:0003677
Phac9g02689 747 MobiDBLite consensus disorder prediction 282 298 - -
Phac9g02689 747 SUPERFAMILY CAD & PB1 domains 619 696 - -
Phac9g02689 747 FunFam Auxin response factor 209 281 - -
Phac9g02689 747 FunFam Auxin response factor 44 148 - -
Phac9g02689 747 SUPERFAMILY DNA-binding pseudobarrel domain 42 175 IPR015300 -
Phac9g02689 747 MobiDBLite consensus disorder prediction 280 327 - -
Phac9g02689 747 MobiDBLite consensus disorder prediction 552 568 - -
Phac9g02689 747 MobiDBLite consensus disorder prediction 299 320 - -
Phac9g02689 747 Pfam B3 DNA binding domain 46 147 IPR003340 GO:0003677
Phac9g02689 747 SMART B3_2 46 148 IPR003340 GO:0003677
Phac9g02689 747 Gene3D - 209 279 - -
Phac9g02689 747 MobiDBLite consensus disorder prediction 18 37 - -
Phac9g02689 747 Pfam Auxin response factor 172 254 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Phac9g02689 747 MobiDBLite consensus disorder prediction 545 592 - -
Phac9g02689 747 Pfam AUX/IAA family 660 706 IPR033389 -
Phac9g02689 747 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 3 708 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac9g02689 747 MobiDBLite consensus disorder prediction 708 747 - -
Phac9g02689 747 MobiDBLite consensus disorder prediction 569 592 - -
Phac9g02689 747 FunFam Auxin response factor 614 708 - -
Phac9g02689 747 Gene3D - 615 708 - -
Phac9g02689 747 CDD B3_DNA 44 146 IPR003340 GO:0003677
Phac9g02689 747 Gene3D - 43 148 IPR015300 -
Phac9g02689 747 ProSiteProfiles PB1 domain profile. 619 701 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02689 Phac-Chr9 25567598 25573476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02689 3 732 B3 DNA Binding Superfamily AT5G62000 65.323 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac9g02689 AUX_IAA 2.7e-12 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02689 - - gmx:100803498 1358.97