Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02686 ATGGATTTCTCAAAACTCAATGACTCGCCCATGTTCCGGCAACAGCTTCAGTGCATGGAAGAGAGTTCAGAATCTTTACGCTCGAGATGTTTCAAGTTCTACAAAGGATCTCGAAAGTACACGGAAGGGCTTGGAGATGCATATGATGGAGACATTGCATTTGCAAGTGCCCTTGAAAGTTTTGGAGGAGGGCATAATGATCCTCTATTTGTGACTTTGGGAGGACCAGTTATGACCAAATTTTCTATTGCATTGAGAGAAATCAGTACATATAAGGAAGTTCTTCGGTCACAGGGGGAGCACATGCTAAATGACCGGTTACTGAACATGCTAAACGTGGATATCCTAGATGTCAAGGAAGCTCGAAGGCGTTTTGAGAAAGCTTCCCTTGTATATGACCAGGCACGTGAGAAGTTTATGTCTCTGAGAAAAAGCACTAGGATTGATATTGCCACTGTCGTAGAAGAGGAATTGCACAATGCAAGATGCTCATTTGAGGAATCTCGTTTCAATCTGGTCAGTGCTCTTCATAATGTTGAGGCCAAGAAGAGGTTTGAGTTTTTGGAGGCTGTCACTGGAGTTATGGATGCTCATCTTCGATATTATCGACAGGGATATCAGCTATTACATGAGCTCGAGCCTTTCATTATCGAGGTTTTGGCTTATACACAAAAGGCAAGAGAAAGTTACAACGATGAGCAGATTAGTCTTTGTGAAAGAATGCTGGAGTACAAAAAACATGTTCATCATGAAAGTATGTTGTCCTTGAATGGCCCTTATGTTTCTCCAGGTAGAGATGGGAATCCAGTGCAGCCTTTTTCAAGGATATCAAATAAAGTGGCAGATGCTGTAACAGAGTCTGCTGAAAATGGAAAGATTCAAATCATTCGGCAAGGATATCTCTCTAAACGATCCTCAAATTTGAGGGGTGATTGGAAGAGAAGGTACTTTGTTCTTGATAGTCGTGGAATGCTTTACTACTTTCGTAAACCATGGAATGGATTACATAGTAGCAATTCATCATTCGTACACAAAAATTGTGCCACTGATAATAGTGCTGGAATTTTGAGTCGCCTGCTTTCTTCACATAACCATGGAGTTATGCCTGATGAAAAATCTGTAGCACGTCACACAGTGAACCTGCTCACATCAACAATCAAGTCTGATGCTGAACAGTCAGATTTAAGGTTCTGCTTCAGGATTATTTCACCATCAAAGAGTTACACATTGCAGGCAGAAAATGCTCTGGATCAGATGGATTGGATGGAAAAGATAACTGGTGTGATTGCCTCCTTATTGAGTGCACAGACACTGTCAGATGTGTCAGAAAATGGTAACGGTCAGTCTGCCAACAAGCTTCTTCTGTTAAAAGGTTGTCCAGATGAGGATCAAGCATTGAGTGGGGATTCTATGTCATCCGAAGACTTGCAGAAGAATAAGCAAAGTACAAAAAGTGAAAAGCCAATTGAAATTCTTAGAAAAGTTAGTGGCAATGACAAATGTGCTGATTGTGATAAACCTGATCCAGACTGGGCATCCTTAAACCTTGGCATTCTCATATGCATTGAATGTTCCGGTGTCCACCGGAATCTTGGTGTACATGTATCAAAAGTAAGATCACTTACCCTTGATGTAAAAGTATGGGATTCAGCTGTCTTGAGCATGCTTCAGTCACTGGGGAATCACTTTGCAAACTCAGTTTGGGAGGAACTGTTGCAATCATCATGTACTTCACAAACAGATGAGACTCCTGATGGATCATCCAAGCCACAGAAAAAGTTATTTCATGCAAGAAAACCATCACATGATGATCCTATTTCACTAAAGGAGAGGTTCATTCATGCAAAGTATGATGCAAAAGTCTTTGTTAGCCGGATAAAGAACAACAACTGTCACCTTTCAACGGGACAACAGTTGGCAGAAAGCATCAAAGCCAATGACAAGAGAGCAGTGTACCGACACATTGTGAAATCTGATGTGAATGTCAATGCTATTAGTGGTGAAGCAGGCTTTTCTTCCAGCATCTCTTCTTCAACTAATGATCCAAACACAACTCAACCAGAGGAGGACATACCAGATGGTTCTACTGTGCTTCACCTGGCATGCCGAAGTTGTGATGTTGCAATGGTAGAGCTACTCCTACAGTATGGGGCAGACATAAATGCTATTGATTCTAAAGGAAAGACACCACTACATTACTGCACTAGGATGGGGAAGCATGCAACTACAAAAGTGCTTATTACAAGGGGGGCCAATCCACTTGCCGTAGATAAAGAAGGCAACACTCCTTTTAAGCTTGCACCTGAATCTGACCATGATGACAAAAATACTCTTGCTCTTAACCAGGAAACGACTCAAAACTCACTAGAAATATGA 2376 0.415 MDFSKLNDSPMFRQQLQCMEESSESLRSRCFKFYKGSRKYTEGLGDAYDGDIAFASALESFGGGHNDPLFVTLGGPVMTKFSIALREISTYKEVLRSQGEHMLNDRLLNMLNVDILDVKEARRRFEKASLVYDQAREKFMSLRKSTRIDIATVVEEELHNARCSFEESRFNLVSALHNVEAKKRFEFLEAVTGVMDAHLRYYRQGYQLLHELEPFIIEVLAYTQKARESYNDEQISLCERMLEYKKHVHHESMLSLNGPYVSPGRDGNPVQPFSRISNKVADAVTESAENGKIQIIRQGYLSKRSSNLRGDWKRRYFVLDSRGMLYYFRKPWNGLHSSNSSFVHKNCATDNSAGILSRLLSSHNHGVMPDEKSVARHTVNLLTSTIKSDAEQSDLRFCFRIISPSKSYTLQAENALDQMDWMEKITGVIASLLSAQTLSDVSENGNGQSANKLLLLKGCPDEDQALSGDSMSSEDLQKNKQSTKSEKPIEILRKVSGNDKCADCDKPDPDWASLNLGILICIECSGVHRNLGVHVSKVRSLTLDVKVWDSAVLSMLQSLGNHFANSVWEELLQSSCTSQTDETPDGSSKPQKKLFHARKPSHDDPISLKERFIHAKYDAKVFVSRIKNNNCHLSTGQQLAESIKANDKRAVYRHIVKSDVNVNAISGEAGFSSSISSSTNDPNTTQPEEDIPDGSTVLHLACRSCDVAMVELLLQYGADINAIDSKGKTPLHYCTRMGKHATTKVLITRGANPLAVDKEGNTPFKLAPESDHDDKNTLALNQETTQNSLEI* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02686 791 Gene3D - 638 790 IPR036770 -
Phac9g02686 791 Pfam Putative GTPase activating protein for Arf 488 623 IPR001164 GO:0005096
Phac9g02686 791 SUPERFAMILY ArfGap/RecO-like zinc finger 486 624 IPR037278 -
Phac9g02686 791 MobiDBLite consensus disorder prediction 671 691 - -
Phac9g02686 791 CDD BAR_SFC_plant 15 215 IPR035670 -
Phac9g02686 791 ProSiteProfiles Ankyrin repeat region circular profile. 726 752 - -
Phac9g02686 791 SMART PH_update 295 432 IPR001849 -
Phac9g02686 791 SMART ANK_2a 726 755 IPR002110 GO:0005515
Phac9g02686 791 SMART ANK_2a 693 722 IPR002110 GO:0005515
Phac9g02686 791 PANTHER CENTAURIN/ARF 2 783 IPR045258 GO:0005096
Phac9g02686 791 MobiDBLite consensus disorder prediction 465 487 - -
Phac9g02686 791 ProSiteProfiles ARF GTPase-activating proteins domain profile. 486 630 IPR001164 GO:0005096
Phac9g02686 791 MobiDBLite consensus disorder prediction 586 602 - -
Phac9g02686 791 CDD ArfGap 489 617 - -
Phac9g02686 791 PRINTS HIV Rev interacting protein signature 517 534 IPR001164 GO:0005096
Phac9g02686 791 PRINTS HIV Rev interacting protein signature 540 561 IPR001164 GO:0005096
Phac9g02686 791 PRINTS HIV Rev interacting protein signature 498 517 IPR001164 GO:0005096
Phac9g02686 791 FunFam ADP-ribosylation factor GTPase-activating protein AGD1 469 631 - -
Phac9g02686 791 Gene3D Arf GTPase activating protein 467 631 IPR038508 -
Phac9g02686 791 ProSiteProfiles Ankyrin repeat region circular profile. 693 724 - -
Phac9g02686 791 SUPERFAMILY BAR/IMD domain-like 6 317 IPR027267 -
Phac9g02686 791 CDD PH_ACAP 297 434 - -
Phac9g02686 791 Pfam PH domain 296 429 IPR001849 -
Phac9g02686 791 Gene3D Arfaptin homology (AH) domain/BAR domain 4 250 IPR027267 -
Phac9g02686 791 SMART arf_gap_3 486 630 IPR001164 GO:0005096
Phac9g02686 791 ProSiteProfiles Ankyrin repeat profile. 693 725 IPR002110 GO:0005515
Phac9g02686 791 SUPERFAMILY Ankyrin repeat 656 774 IPR036770 -
Phac9g02686 791 SMART 5bar 5 218 IPR004148 GO:0005515|GO:0005737
Phac9g02686 791 ProSiteProfiles PH domain profile. 294 430 IPR001849 -
Phac9g02686 791 Gene3D - 287 445 IPR011993 -
Phac9g02686 791 Pfam BAR domain of APPL family 6 233 IPR004148 GO:0005515|GO:0005737
Phac9g02686 791 Pfam Ankyrin repeats (many copies) 695 747 IPR002110 GO:0005515
Phac9g02686 791 MobiDBLite consensus disorder prediction 671 692 - -
Phac9g02686 791 SUPERFAMILY PH domain-like 294 434 - -
Phac9g02686 791 Coils Coil 118 138 - -
Phac9g02686 791 ProSiteProfiles Ankyrin repeat profile. 726 758 IPR002110 GO:0005515
Phac9g02686 791 MobiDBLite consensus disorder prediction 578 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02686 Phac-Chr9 25516743 25524189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02686 496 623 C2H2 Transcription Factor Family AT4G21160 44.186 2.20e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02686 K12489 - gmx:100797073 1267.29