Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02673 ATGGAGAGAAGATCACATTCCACTGAAAGAGAAGAGGAACATGATTTGTTCCCAATATACTCTGAAAGGTCACAGCAAGACATGTCAGCCATGGTGTCAGCCCTCACACAAGTCATGGGTGGCTCCAATGATTCTCTTCAACACCATGAACACCTTTTAACTTCTTCCCACAACACCTCATCCCAGAATAATAATGAACAATCCCAAGTGCCACAACAAGATCAAGGGAGTGGAAGAAGAAGACACTACAGAGGAGTGAGGCAGCGTCCATGGGGAAAATGGGCTGCAGAGATTCGTGATCCGAAGAAGGCAGCGAGGGTATGGCTTGGAACTTTCGACACTGCAGAAGCTGCAGCTCTTGCTTACGATGCAGCTGCTCTGAAATTCAAAGGAAGCAAAGCCAAACTCAATTTCTCTGAGAGGGTTCAAGGTACTGACGAATTTGGTTACCTCACAAATCAACCCCTTTCATCAACCACCACTAGCAATGACCAAGCTTCCAACCCTGTTGCTCCACACTTCACTCAAGAAACTTATTCACCAAGTCACTATTACCATCCACAACAAATCATGGGTACTGGTGGAAGTAGCAGCTTCAACAACCAAGATATGCTTCGTTTCTATGGGGGAGACATGTTTGTTTCTTCTCAGCCAGCTGCATCTTCGTCTTCTTCTACAAGTCTCTCTCAGCAGCAAGAAGAGTTTCTGAGATTTTCGACGCAGTTTGGAGGTTCTTCTTCTGAGCCTCCTAGGAATTGGAGGGGTGATGGATATTGA 777 0.4582 MERRSHSTEREEEHDLFPIYSERSQQDMSAMVSALTQVMGGSNDSLQHHEHLLTSSHNTSSQNNNEQSQVPQQDQGSGRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDAAALKFKGSKAKLNFSERVQGTDEFGYLTNQPLSSTTTSNDQASNPVAPHFTQETYSPSHYYHPQQIMGTGGSSSFNNQDMLRFYGGDMFVSSQPAASSSSSTSLSQQQEEFLRFSTQFGGSSSEPPRNWRGDGY* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02673 258 MobiDBLite consensus disorder prediction 216 258 - -
Phac9g02673 258 MobiDBLite consensus disorder prediction 216 248 - -
Phac9g02673 258 MobiDBLite consensus disorder prediction 1 20 - -
Phac9g02673 258 SMART rav1_2 82 145 IPR001471 GO:0003700|GO:0006355
Phac9g02673 258 MobiDBLite consensus disorder prediction 22 76 - -
Phac9g02673 258 SUPERFAMILY DNA-binding domain 82 140 IPR016177 GO:0003677
Phac9g02673 258 CDD AP2 82 138 IPR001471 GO:0003700|GO:0006355
Phac9g02673 258 PANTHER DNA-BINDING DOMAIN 45 221 IPR044808 GO:0003700|GO:0009873
Phac9g02673 258 ProSiteProfiles AP2/ERF domain profile. 82 139 IPR001471 GO:0003700|GO:0006355
Phac9g02673 258 MobiDBLite consensus disorder prediction 1 88 - -
Phac9g02673 258 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Phac9g02673 258 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Phac9g02673 258 Pfam AP2 domain 82 131 IPR001471 GO:0003700|GO:0006355
Phac9g02673 258 FunFam Ethylene-responsive transcription factor 2 81 140 - -
Phac9g02673 258 Gene3D AP2/ERF domain 81 141 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02673 Phac-Chr9 25341047 25343070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02673 15 154 AP2-EREBP Transcription Factor Family AT5G61890 64.828 1.95e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac9g02673 AP2 4.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02673 - - gmx:100799190 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02673 9 25341047 25343070 Phac9g02673 9 25341047 25343070 ECH