LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac9g02672	ATGGATCCGGACGCATTCACCGCCAGCCTATTCAAGTGGGACCCACGCACCGTCCTCCCCGCCGCACCGCCTCCTCGGCCCCCGCCGCCTCTCCTTGAATATGCCGTCGCCCCGCCCCCCGTCGCCCCGGCTTACCACCTCGCCAGGGCTGCTCCCCGCGAACTCGGCGGCCTCGAGGAGCTCTTCCAGGCCTACGGCATACGCTACTACACGGCGGCCAAGATCGCCGAGCTCGGCTTCACCGTGAGCACGCTGGTTGACATGAAGGACGAGGAGCTCGACGACATGATGAACAGCCTCTCCCAGATTTTCCGCTGGGACCTCCTCGTGGGCGAACGCTACGGCATCAAAGCCGCCGTCAGAGCCGAACGTCGTCGCATCGACGACGACGAGATCAAACGCCGCAATAGCAACCTCCTCTCCACCGACACCACCACCACCAACGCCCTCGATGCCCTCTCTCAGGAAGGTTTGTCGGAGGAGCCGGTGGTGCAACGAGAGAAGGAGGCGGTGGGGAGCGGGGGAGGGAGCACGTGGGAGGTGGTTGCGGCGGAGGAGAGGAGGAAGCAGCAGAGGAGACGGAAGACTCGGATGAAGGCGAATCATCAGCAGGAGGAGAACGAGGATGTTGAGGATGAGGAGGGAGAAGAGAACGAGGAAGGGAACAACAACAGTGGTGGAGGTTGTGAGAGGCAGAGGGAGCACCCGTTCATCGTGACGGAGCCTGGGGAGGTTGCACGTGGGAAGAAGAATGGGTTGGACTATCTGTTTCACCTCTACGAGCAGTGCCGTGAGTTCTTGATGCAAGTTCAGGCCATCGCGAAGGACCGTGGTGAAAAGTGCCCCACCAAGGTGACAAATCAGGTGTTTAGGTACGCGAAGAAAGCTGGAGCAAGCTACATCAACAAGCCAAAGATGCGACACTACGTCCACTGCTACGCCTTACATTGTCTCGACGAGGATGTGTCGAACGAGCTTCGTAGGGCGTTCAAGGAGAGAGGAGAGAACGTTGGAGCATGGAGACAAGCATGTTACAAGCCCCTTGTGGCCATCGCAGCGCGTCAAGGTTGGGACATTGATGCCATATTCAACGCGCACCCTCGTCTTTCCATTTGGTACGTTCCGACGAAGCTCCGTCAGCTTTGTCACGCGGAGAGGAACAGCGCCGCCGCTTCGAGCTCCGTGTCTGTGGGCAGCGCCCACCTTCCCTTCTAG	1215	0.6016	MDPDAFTASLFKWDPRTVLPAAPPPRPPPPLLEYAVAPPPVAPAYHLARAAPRELGGLEELFQAYGIRYYTAAKIAELGFTVSTLVDMKDEELDDMMNSLSQIFRWDLLVGERYGIKAAVRAERRRIDDDEIKRRNSNLLSTDTTTTNALDALSQEGLSEEPVVQREKEAVGSGGGSTWEVVAAEERRKQQRRRKTRMKANHQQEENEDVEDEEGEENEEGNNNSGGGCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLMQVQAIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEDVSNELRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNSAAASSSVSVGSAHLPF*	405

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac9g02672	404	MobiDBLite	consensus disorder prediction	154	232	-	-
	Phac9g02672	404	PANTHER	PROTEIN LEAFY	1	403	IPR002910	GO:0003677\|GO:0006355
	Phac9g02672	404	Gene3D	Protein LEAFY	227	396	IPR038276	-
	Phac9g02672	404	Coils	Coil	181	220	-	-
	Phac9g02672	404	Pfam	DNA Binding Domain (C-terminal) Leafy/Floricaula	225	390	IPR035209	GO:0003677
	Phac9g02672	404	Pfam	Floricaula / Leafy protein SAM domain	54	131	IPR035079	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac9g02672	1	399	Orphan Transcription Factor Family	AT5G61850	64.493	5.05e-164	465

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LFY	Phac9g02672		C_LFY_FLO	4.2e-109	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac9g02672	-		-	gmx:100798196	636.721

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phac9g02672	9	25211912	25214385	Phac9g02672	9	25211912	25214385	ECH