Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02642 ATGTCAAAGTATCAAGGTGAAGAAGAGATGAGAAAAGCACCAAAGGGGCAATTCGTTGTTTACGTGGGGGAAGAACTAACAAGATTTACCTTACCACTCTCTTACTTGAAGAACCCTATTTTTCAGCAACTCTTGAAGAAATCTGCAGAGGAGTACGGATACAGTGACTCAAGAGGCATAGTCCTTCCATGCGATGAATCAACCTTCCAAAACTTCATCAACTCCAAGCTCAGGGGATACTAG 243 0.4239 MSKYQGEEEMRKAPKGQFVVYVGEELTRFTLPLSYLKNPIFQQLLKKSAEEYGYSDSRGIVLPCDESTFQNFINSKLRGY* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02642 80 Pfam Auxin responsive protein 10 74 IPR003676 GO:0009733
Phac9g02642 80 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 12 71 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02642 Phac-Chr9 24887024 24887606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02642 5 70 Calmodulin-binding Proteins AT5G20810 43.939 1.75e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02642 K14488 - cic:CICLE_v10026926mg 102.449