Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02638 ATGGGTAGATCTCCTTGTTGTGAGAAGGAACACACAAACAAAGGAGCTTGGACCAAAGAGGAAGACGAACGCCTCATCAACTACATCAAACTCCATGGTGAAGGCTGTTGGAGATCCCTCCCCAAAGCTGCTGGCTTGCTCAGATGTGGCAAGAGTTGCAGACTCAGATGGATAAATTACCTCAGACCTGATCTAAAGAGAGGCAACTTCACTGAAGATGAAGACGAACTCATCATTAACCTCCACAGCTTACTAGGAAACAAATGGTCTTTGATTGCCGCAAGGTTACCCGGAAGAACCGATAACGAAATCAAAAACTATTGGAACACTCACATCAAGCGGAAACTCTACAGCCGCGGAATCGACCCGCAAACCCATCGACCACTCAACGCCGCCTCCGCCACTCCGGCAACCGCCGCGGTTCCGCCTCCCTCCCCCGCCGCTGTCCCTGTGGCAACGTCGTCATCCAACAAAAAAATAAACAGCGACACCATTAGCAGCTCCAACACGCTCACCCATGATGTTGTTATTACCAACAACAGTAACAACAGCAACGGTTTTCAGTTGGTGAGCAATAGTGCTTATGCCAACACCGCAACGAAGGTTGGAACCGATGAAGATTCTAACAGCAGCAGCGGCGTTACCGTGGAAGAATCCTTCCCTCACCATCAACTCAACTTGGACCTTTCCATTGGCCTTCCCTCTTCTCACCAAGTTTCTTCTTCGGTGAACCCAGAAAAGTTGAAAGCGCAAGAGCATGATCAAAAACCGCATGTGTTGTACAAGTGGTATGGGAACATTACTGGCCAAGCTGTTTGTCTTTGTTACAGTCTAGGGCTTCAAAGCGACCAAGCTTGTTATTGCAAAGGCGTGGGTGCTACTGCTACTACTACCATGGTTACTACAACTGCCACAGATAGTAATCTATATAGATTTTACAGACCCATGAATATTTAG 957 0.4786 MGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEDEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNAASATPATAAVPPPSPAAVPVATSSSNKKINSDTISSSNTLTHDVVITNNSNNSNGFQLVSNSAYANTATKVGTDEDSNSSSGVTVEESFPHHQLNLDLSIGLPSSHQVSSSVNPEKLKAQEHDQKPHVLYKWYGNITGQAVCLCYSLGLQSDQACYCKGVGATATTTMVTTTATDSNLYRFYRPMNI* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02638 318 FunFam Myb transcription factor 68 137 - -
Phac9g02638 318 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac9g02638 318 CDD SANT 69 112 IPR001005 -
Phac9g02638 318 MobiDBLite consensus disorder prediction 134 165 - -
Phac9g02638 318 CDD SANT 16 61 IPR001005 -
Phac9g02638 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac9g02638 318 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac9g02638 318 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Phac9g02638 318 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Phac9g02638 318 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac9g02638 318 Gene3D - 14 66 - -
Phac9g02638 318 MobiDBLite consensus disorder prediction 150 165 - -
Phac9g02638 318 FunFam MYB-related transcription factor 13 66 - -
Phac9g02638 318 SMART sant 13 63 IPR001005 -
Phac9g02638 318 SMART sant 66 114 IPR001005 -
Phac9g02638 318 Gene3D - 68 135 - -
Phac9g02638 318 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 229 - -
Phac9g02638 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02638 Phac-Chr9 24828902 24831075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02638 1 235 MYB Transcription Factor Family AT4G09460 59.149 2.39e-91 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac9g02638 Myb_DNA-binding 4.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02638 K09422 - gmx:778033 477.248