Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02626 ATGAATTTTTGTACTTTTTTGCATTTTGACTTTTTGTTTAATGGTTGGCATTCCTTGACACGAACAAGTGATTATTTGAACCGTTTAAATCAATACCGCCAGAGGGTTTGGACGTGCAAAGTAACTGGTAAAACTGGCTTGACTTATGAAGAGGCTCTGGTGTCAGAGATGCATGCCACTGAGAAAGTTCAACAGATTCCGGAAGAATTAATGGCACCTGCACTTAGGATTATTCAGTACAGCATGCTCCCTTTGAAGGATCTTGTTGATTCTATTGCTGAAAAGTTGAAGGAGCAGTTGTTTGTGGGCTCTCAATTGTATGGAAAAAAAAATGACAGGGTGTGTCCTTGCAAAATATTAAAAGTGATGCAGGAAGATGCTGAAAATATCAGCTATGTGGTGGCTTGGCTTGATGAGAGCAATAATGTTATTGAAAGAGCAGAAGTCAGTTCTCAAGATTTGGTGCAGAAGAAACGACCTTTTAGTAGAAATATTTTGAAGTCTTTTGTCCGTGGATGTACATATCGAAATGCTCCTTGGGTTTTACACGATAAACTTGCAAAAAAACATGGAATCTCAACTGACATTCCAGAGGAGTTAAGAGGAAAGGTTTCCTTTAACAATGGACTTGTGGTCTTCACCAAAAAAAGAAAGCATGAGGAAGAGTCAATCCAATATCCAATTGATGATCTATTAGTGAAGCCTAGTCCAGATGATCCTGTTTTCAGTAGTCGTCCTTCTCCATCAAGAGACTTTAATGTTCCTATTTATTGTGTAGGGGATCTCTTAATGGTTTGGGATTTTTTTATGTCTTTTGGTAAACTGTTACGGTTGTCTCCTTACTCTCTCAAAGATTTTGAAAAAGCAATCAGTCACAAGGATAGCAATGTAGCTCTCCTGGTGGAATCTCATGCAGTACTCTTTCGAGTGCTCATCAAAGGTGATGATGAATACTATGCAGCTGTTCAAGACAAATTACCGAAGAAGATTACAATGATTAGTTGGAAAGAGTATTTATGTGAGTTTTTAGTAATGATCAAAATTCCCAAGCTGCGGCAGTATGAAGCAACAATTAAACGGGGACATTATGGTTATGTTGATGTCAATGCTAAATTAGAAATCTTTAGCGAATTAGTCAATCGAGCCCTTGGTACTGCTATTGTCAGGGAAAAATTGGATGAGTATATTAAACAAAGGCGGGTACTGGGGGCTGCTAAAAGGGAAGAAGCTATTGAAGCTTCTGCGAAGAGAAGAAAAGTAAAGGAGCAGTTGAAAGCTGATTCTGGAAGCAACTGTGGTGAGAATTGGCGTCATCTTGATCAGGATGAAACTGTATCAACAGATAATAATAATCACAGAATACAGAATGGTAGTATTGGAAAGAATAGAAACAAAGAGATAGAATCATCTTGGCAAAAAGATGCATGGGATAGTGGTATCAAGCATTCAAACCTTGCTTCAAAAATGTCAGCTGAAAAGCTGAATCGATCTGCAGAATTCAGAAAAGTCTACAGAAAGGAATCACTGAAACAACCAAAGGGTGATAAGGATCAATCAGAGAAAAACTACGAACAAAGGAGAGAATATTTTGATCGGGAGATAGAGAAATGGTGTATTCGTACAAGTTTCCTAGGTATGGACAGATATTATAATAGGTATTGGTGGTTTTACCGTGATGGAAGGATATTTGTTGAAAGTCCTGAATCCAAGGAGTGGGGATACTACAGTAGCAAGGGAGAGCTTGATGGATTGATGACTTCACTGAATTGCAAAGGTGAGAGGGAAAGGGCACTGCTAAAACAACTGAAACAATATTATAGTAGAATATGGTGA 1833 0.3819 MNFCTFLHFDFLFNGWHSLTRTSDYLNRLNQYRQRVWTCKVTGKTGLTYEEALVSEMHATEKVQQIPEELMAPALRIIQYSMLPLKDLVDSIAEKLKEQLFVGSQLYGKKNDRVCPCKILKVMQEDAENISYVVAWLDESNNVIERAEVSSQDLVQKKRPFSRNILKSFVRGCTYRNAPWVLHDKLAKKHGISTDIPEELRGKVSFNNGLVVFTKKRKHEEESIQYPIDDLLVKPSPDDPVFSSRPSPSRDFNVPIYCVGDLLMVWDFFMSFGKLLRLSPYSLKDFEKAISHKDSNVALLVESHAVLFRVLIKGDDEYYAAVQDKLPKKITMISWKEYLCEFLVMIKIPKLRQYEATIKRGHYGYVDVNAKLEIFSELVNRALGTAIVREKLDEYIKQRRVLGAAKREEAIEASAKRRKVKEQLKADSGSNCGENWRHLDQDETVSTDNNNHRIQNGSIGKNRNKEIESSWQKDAWDSGIKHSNLASKMSAEKLNRSAEFRKVYRKESLKQPKGDKDQSEKNYEQRREYFDREIEKWCIRTSFLGMDRYYNRYWWFYRDGRIFVESPESKEWGYYSSKGELDGLMTSLNCKGERERALLKQLKQYYSRIW* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02626 610 SMART testlast3 256 317 IPR018501 -
Phac9g02626 610 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 20 105 IPR013136 -
Phac9g02626 610 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 539 605 IPR028941 -
Phac9g02626 610 MobiDBLite consensus disorder prediction 448 465 - -
Phac9g02626 610 ProSiteProfiles DDT domain profile. 256 317 IPR018501 -
Phac9g02626 610 Pfam DDT domain 258 313 IPR018501 -
Phac9g02626 610 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 217 609 - -
Phac9g02626 610 MobiDBLite consensus disorder prediction 446 466 - -
Phac9g02626 610 ProSiteProfiles WAC domain profile. 7 113 IPR013136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02626 Phac-Chr9 24730677 24736703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02626 258 313 Homeobox Transcription Factor Family AT1G28420 44.643 3.58e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Phac9g02626 WAC_Acf1_DNA_bd 2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02626 - - gmx:100784607 942.569