Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02625 ATGCCGCTTTTGAGGAGAAAGCCTTTTTCCCTGGCTGAGCCACCTAATGATTTGGAGCCATGCGAGAGTCTTTTTCAAATTAGATTTACTAAAGAAATATTTCGAGATTATGATGATTATTTGAACCGTTTAAATCAATACCGCCAGAGGGTTTGGACGTGCAAAGTAACTGGTAAAACTGGCTTGACTTATGAAGAGGCTCTGGTGTCAGAGATGCATGCCACTGAGAAAGTTCAACAGATTCCGGAAGAATTAATGGCACCTGCACTTAGGATTATTCAGTACAGCATGCTCCCTTTGAAGGATCTTGTTGATTCTATTGCTGAAAAGTTGAAGGAGCAGTTGTTTGTGGGCTCTCAATTGTATGGAAAAAAAAATGACAGGGTGTGTCCTTGCAAAATATTAAAAGTGATGCAGGAAGATGCTGAAAATATCAGCTATGTGGTGGCTTGGCTTGATGAGAGCAATAATGTTATTGAAAGAGCAGAAGTCAGTTCTCAAGATTTGGTGCAGAAGAAACGACCTTTTAGTAGAAATATTTTGAAGTCTTTTGTCCGTGGATGTACATATCGAAATGCTCCTTGGGTTTTACACGATAAACTTGCAAAAAAACATGGAATCTCAACTGACATTCCAGAGGAGTTAAGAGGAAAGGTTTCCTTTAACAATGGACTTGTGGTCTTCACCAAAAAAAGAAAGCATGAGGAAGAGTCAATCCAATATCCAATTGATGATCTATTAGTGAAGCCTAGTCCAGATGATCCTGTTTTCAGTAGTCGTCCTTCTCCATCAAGAGACTTTAATGTTCCTATTTATTGTGTAGGGGATCTCTTAATGGTTTGGGATTTTTTTATGTCTTTTGGTAAACTGTTACGGTTGTCTCCTTACTCTCTCAAAGATTTTGAAAAAGCAATCAGTCACAAGGATAGCAATGTAGCTCTCCTGGTGGAATCTCATGCAGTACTCTTTCGAGTGCTCATCAAAGGTGATGATGAATACTATGCAGCTGTTCAAGACAAATTACCGAAGAAGATTACAATGATTAGTTGGAAAGAGTATTTATGTGAGTTTTTAGTAATGATCAAAATTCCCAAGCTGCGGCAGTATGAAGCAACAATTAAACGGGGACATTATGGTTATGTTGATGTCAATGCTAAATTAGAAATCTTTAGCGAATTAGTCAATCGAGCCCTTGGTACTGCTATTGTCAGGGAAAAATTGGATGAGTATATTAAACAAAGGCGGGTACTGGGGGCTGCTAAAAGGGAAGAAGCTATTGAAGCTTCTGCGAAGAGAAGAAAAGTAAAGGAGCAGTTGAAAGCTGATTCTGGAAGCAACTGTGGTGAGAATTGGCGTCATCTTGATCAGGATGAAACTGTATCAACAGATAATAATAATCACAGAATACAGAATGGTAGTATTGGAAAGAATAGAAACAAAGAGATAGAATCATCTTGGCAAAAAGATGCATGGGATAGGTTGGACTTGTGTGCTGTATCTTCATGTCTTTATGAAAATCTACGAAACACATTTTTCTCTATTTCTTGGTTATTCTTGTACTTAACTTTTTCTATAAATATATCAACAGTGGTATCAAGCATTCAAACCTTGCTTCAAAAATGTCAGCTGAAAAGCTGA 1638 0.3785 MPLLRRKPFSLAEPPNDLEPCESLFQIRFTKEIFRDYDDYLNRLNQYRQRVWTCKVTGKTGLTYEEALVSEMHATEKVQQIPEELMAPALRIIQYSMLPLKDLVDSIAEKLKEQLFVGSQLYGKKNDRVCPCKILKVMQEDAENISYVVAWLDESNNVIERAEVSSQDLVQKKRPFSRNILKSFVRGCTYRNAPWVLHDKLAKKHGISTDIPEELRGKVSFNNGLVVFTKKRKHEEESIQYPIDDLLVKPSPDDPVFSSRPSPSRDFNVPIYCVGDLLMVWDFFMSFGKLLRLSPYSLKDFEKAISHKDSNVALLVESHAVLFRVLIKGDDEYYAAVQDKLPKKITMISWKEYLCEFLVMIKIPKLRQYEATIKRGHYGYVDVNAKLEIFSELVNRALGTAIVREKLDEYIKQRRVLGAAKREEAIEASAKRRKVKEQLKADSGSNCGENWRHLDQDETVSTDNNNHRIQNGSIGKNRNKEIESSWQKDAWDRLDLCAVSSCLYENLRNTFFSISWLFLYLTFSINISTVVSSIQTLLQKCQLKS* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02625 545 Pfam DDT domain 273 328 IPR018501 -
Phac9g02625 545 SMART testlast3 271 332 IPR018501 -
Phac9g02625 545 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 24 120 IPR013136 -
Phac9g02625 545 ProSiteProfiles WAC domain profile. 22 128 IPR013136 -
Phac9g02625 545 ProSiteProfiles DDT domain profile. 271 332 IPR018501 -
Phac9g02625 545 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02625 Phac-Chr9 24730677 24736703 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02625 273 328 Homeobox Transcription Factor Family AT1G28420 44.643 3.62e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Phac9g02625 WAC_Acf1_DNA_bd 2.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02625 - - gmx:100784607 801.201