Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02622 ATGCCGCTTTTGAGGAGAAAGCCTTTTTCCCTGGCTGAGCCACCTAATGATTTGGAGCCATGCGAGAGTCTTTTTCAAATTAGATTTACTAAAGAAATATTTCGAGATTATGATGATTATTTGAACCGTTTAAATCAATACCGCCAGAGGGTTTGGACGTGCAAAGTAACTGGTAAAACTGGCTTGACTTATGAAGAGGCTCTGGTGTCAGAGATGCATGCCACTGAGAAAGTTCAACAGATTCCGGAAGAATTAATGGCACCTGCACTTAGGATTATTCAGTACAGCATGCTCCCTTTGAAGGATCTTGTTGATTCTATTGCTGAAAAGTTGAAGGAGCAGTTGTTTGTGGGCTCTCAATTGTATGGAAAAAAAAATGACAGGGTGTGTCCTTGCAAAATATTAAAAGTGATGCAGGAAGATGCTGAAAATATCAGCTATGTGGTGGCTTGGCTTGATGAGAGCAATAATGTTATTGAAAGAGCAGAAGTCAGTTCTCAAGATTTGGTGCAGAAGAAACGACCTTTTAGTAGAAATATTTTGAAGTCTTTTGTCCGTGGATGTACATATCGAAATGCTCCTTGGGTTTTACACGATAAACTTGCAAAAAAACATGGAATCTCAACTGACATTCCAGAGGAGTTAAGAGGAAAGGTTTCCTTTAACAATGGACTTGTGGTCTTCACCAAAAAAAGAAAGCATGAGGAAGAGTCAATCCAATATCCAATTGATGATCTATTAGTGAAGCCTAGTCCAGATGATCCTGTTTTCAGTAGTCGTCCTTCTCCATCAAGAGACTTTAATGTTCCTATTTATTGTGTAGGGGATCTCTTAATGGTTTGGGATTTTTTTATGTCTTTTGGTAAACTGTTACGGTTGTCTCCTTACTCTCTCAAAGATTTTGAAAAAGCAATCAGTCACAAGGATAGCAATGTAGCTCTCCTGGTGGAATCTCATGCAGTACTCTTTCGAGTGCTCATCAAAGGTGATGATGAATACTATGCAGCTGTTCAAGACAAATTACCGAAGAAGATTACAATGATTAGTTGGAAAGAGTATTTATGTGAGTTTTTAGTAATGATCAAAATTCCCAAGCTGCGGCAGTATGAAGCAACAATTAAACGGGGACATTATGGTTATGTTGATGTCAATGCTAAATTAGAAATCTTTAGCGAATTAGTCAATCGAGCCCTTGGTACTGCTATTGTCAGGGAAAAATTGGATGAGTATATTAAACAAAGGCGGGTACTGGGGGCTGCTAAAAGGGAAGAAGCTATTGAAGCTTCTGCGAAGAGAAGAAAAGTAAAGGAGCAGTTGAAAGCTGATTCTGGAAGCAACTGTGGTGAGAATTGGCGTCATCTTGATCAGGATGAAACTGTATCAACAGATAATAATAATCACAGAATACAGAATGGTAGTATTGGAAAGAATAGAAACAAAGAGATAGAATCATCTTGGCAAAAAGATGCATGGGATAGTGGTATCAAGCATTCAAACCTTGCTTCAAAAATGTCAGCTGAAAAGCTGAATCGATCTGCAGAATTCAGAAAAGTCTACAGAAAGGAATCACTGAAACAACCAAAGGGTGATAAGGATCAATCAGAGAAAAACTACGAACAAAGGAGAGAATATTTTGATCGGGAGATAGAGAAATGGTGTATTCGTACAAGTTTCCTAGGTATGGACAGATATTATAATAGGTATTGGTGGTTTTACCGTGATGGAAGGATATTTGTTGAAAGTCCTGAATCCAAGGAGTGGGGATACTACAGTAGCAAGGGAGAGCTTGATGGATTGATGACTTCACTGAATTGCAAAGGTGAGAGGGAAAGGGCACTGCTAAAACAACTGAAACAATATTATAGTAGAATATGGTGA 1878 0.385 MPLLRRKPFSLAEPPNDLEPCESLFQIRFTKEIFRDYDDYLNRLNQYRQRVWTCKVTGKTGLTYEEALVSEMHATEKVQQIPEELMAPALRIIQYSMLPLKDLVDSIAEKLKEQLFVGSQLYGKKNDRVCPCKILKVMQEDAENISYVVAWLDESNNVIERAEVSSQDLVQKKRPFSRNILKSFVRGCTYRNAPWVLHDKLAKKHGISTDIPEELRGKVSFNNGLVVFTKKRKHEEESIQYPIDDLLVKPSPDDPVFSSRPSPSRDFNVPIYCVGDLLMVWDFFMSFGKLLRLSPYSLKDFEKAISHKDSNVALLVESHAVLFRVLIKGDDEYYAAVQDKLPKKITMISWKEYLCEFLVMIKIPKLRQYEATIKRGHYGYVDVNAKLEIFSELVNRALGTAIVREKLDEYIKQRRVLGAAKREEAIEASAKRRKVKEQLKADSGSNCGENWRHLDQDETVSTDNNNHRIQNGSIGKNRNKEIESSWQKDAWDSGIKHSNLASKMSAEKLNRSAEFRKVYRKESLKQPKGDKDQSEKNYEQRREYFDREIEKWCIRTSFLGMDRYYNRYWWFYRDGRIFVESPESKEWGYYSSKGELDGLMTSLNCKGERERALLKQLKQYYSRIW* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02622 625 ProSiteProfiles WAC domain profile. 22 128 IPR013136 -
Phac9g02622 625 MobiDBLite consensus disorder prediction 461 481 - -
Phac9g02622 625 SMART testlast3 271 332 IPR018501 -
Phac9g02622 625 ProSiteProfiles DDT domain profile. 271 332 IPR018501 -
Phac9g02622 625 Pfam DDT domain 273 328 IPR018501 -
Phac9g02622 625 MobiDBLite consensus disorder prediction 463 480 - -
Phac9g02622 625 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 232 624 - -
Phac9g02622 625 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 24 120 IPR013136 -
Phac9g02622 625 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 554 620 IPR028941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02622 Phac-Chr9 24730677 24736703 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02622 273 328 Homeobox Transcription Factor Family AT1G28420 44.643 2.97e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Phac9g02622 WAC_Acf1_DNA_bd 3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02622 - - gmx:100784607 1001.89