Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02621 ATGCCGCTTTTGAGGAGAAAGCCTTTTTCCCTGGCTGAGCCACCTAATGATTTGGAGCCATGCGAGAGTCTTTTTCAAATTAGATTTACTAAAGAAATATTTCGAGATTATGATGATTATTTGAACCGTTTAAATCAATACCGCCAGAGGGTTTGGACGTGCAAAGTAACTGGTAAAACTGGCTTGACTTATGAAGAGGCTCTGGTGTCAGAGATGCATGCCACTGAGAAAGTTCAACAGATTCCGGAAGAATTAATGGCACCTGCACTTAGGATTATTCAGTACAGCATGCTCCCTTTGAAGGATCTTGTTGATTCTATTGCTGAAAAGTTGAAGGAGCAGTTGTTTGTGGGCTCTCAATTGTATGGAAAAAAAAATGACAGGGTGTGTCCTTGCAAAATATTAAAAGTGATGCAGGAAGATGCTGAAAATATCAGCTATGTGGTGGCTTGGCTTGATGAGAGCAATAATGTTATTGAAAGAGCAGAAGTCAGTTCTCAAGATTTGGTGCAGAAGAAACGACCTTTTAGTAGAAATATTTTGAAGTCTTTTGTCCGTGGATGTACATATCGAAATGCTCCTTGGGTTTTACACGATAAACTTGCAAAAAAACATGGAATCTCAACTGACATTCCAGAGGAGTTAAGAGGAAAGGTTTCCTTTAACAATGGACTTGTGGTCTTCACCAAAAAAAGAAAGCATGAGGAAGAGTCAATCCAATATCCAATTGATGATCTATTAGTGAAGCCTAGTCCAGATGATCCTGTTTTCAGTAGTCGTCCTTCTCCATCAAGAGACTTTAATGTTCCTATTTATTGTGTAGGGGATCTCTTAATGGTTTGGGATTTTTTTATGTCTTTTGGTAAACTGTTACGGTTGTCTCCTTACTCTCTCAAAGATTTTGAAAAAGCAATCAGTCACAAGGATAGCAATGTAGCTCTCCTGGTGGAATCTCATGCAGTACTCTTTCGAGTGCTCATCAAAGGTGATGATGAATACTATGCAGCTGTTCAAGACAAATTACCGAAGAAGATTACAATGATTAGTTGGAAAGAGTATTTATGTGAGTTTTTAGTAATGATCAAAATTCCCAAGCTGCGGCAGTATGAAGCAACAATTAAACGGGGACATTATGGTTATGTTGATGTCAATGCTAAATTAGAAATCTTTAGCGAATTAGTCAATCGAGCCCTTGGTACTGCTATTGTCAGGGAAAAATTGGATGAGTATATTAAACAAAGGCGGGTACTGGGGGCTGCTAAAAGGGAAGAAGCTATTGAAGCTTCTGCGAAGAGAAGAAAAGTAAAGGAGCAGTTGAAAGCTGATTCTGGAAGCAACTGTGGTGAGAATTGGCGTCATCTTGATCAGGATGAAACTGTATCAACAGATAATAATAATCACAGAATACAGAATGGTAGTATTGGAAAGAATAGAAACAAAGAGATAGAATCATCTTGGCAAAAAGATGCATGGGATAGTGGTATCAAGCATTCAAACCTTGCTTCAAAAATGTCAGCTGAAAAGCTGAATCGATCTGCAGAATTCAGAAAAGTCTACAGAAAGGAATCACTGAAACAACCAAAGGGTGATAAGGATCAATCAGAGAAAAACTACGAACAAAGGAGAGAATATTTTGATCGGGAGATAGAGAAATGGTGTATTCGTACAAGTTTCCTAGGTATGGACAGATATTATAATAGGTATTGGTGGTTTTACCGTGATGGAAGGATATTTGTTGAAAGTCCTGAATCCAAGGAGTGGGGATACTACAGTAGCAAGGGAGAGCTCAGAATTGCAGAAAAATTCAAAGGATTTGTTGCATAA 1824 0.3838 MPLLRRKPFSLAEPPNDLEPCESLFQIRFTKEIFRDYDDYLNRLNQYRQRVWTCKVTGKTGLTYEEALVSEMHATEKVQQIPEELMAPALRIIQYSMLPLKDLVDSIAEKLKEQLFVGSQLYGKKNDRVCPCKILKVMQEDAENISYVVAWLDESNNVIERAEVSSQDLVQKKRPFSRNILKSFVRGCTYRNAPWVLHDKLAKKHGISTDIPEELRGKVSFNNGLVVFTKKRKHEEESIQYPIDDLLVKPSPDDPVFSSRPSPSRDFNVPIYCVGDLLMVWDFFMSFGKLLRLSPYSLKDFEKAISHKDSNVALLVESHAVLFRVLIKGDDEYYAAVQDKLPKKITMISWKEYLCEFLVMIKIPKLRQYEATIKRGHYGYVDVNAKLEIFSELVNRALGTAIVREKLDEYIKQRRVLGAAKREEAIEASAKRRKVKEQLKADSGSNCGENWRHLDQDETVSTDNNNHRIQNGSIGKNRNKEIESSWQKDAWDSGIKHSNLASKMSAEKLNRSAEFRKVYRKESLKQPKGDKDQSEKNYEQRREYFDREIEKWCIRTSFLGMDRYYNRYWWFYRDGRIFVESPESKEWGYYSSKGELRIAEKFKGFVA* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02621 607 ProSiteProfiles WAC domain profile. 22 128 IPR013136 -
Phac9g02621 607 MobiDBLite consensus disorder prediction 461 481 - -
Phac9g02621 607 Pfam DDT domain 273 328 IPR018501 -
Phac9g02621 607 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 24 120 IPR013136 -
Phac9g02621 607 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 554 586 IPR028941 -
Phac9g02621 607 SMART testlast3 271 332 IPR018501 -
Phac9g02621 607 ProSiteProfiles DDT domain profile. 271 332 IPR018501 -
Phac9g02621 607 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 232 597 - -
Phac9g02621 607 MobiDBLite consensus disorder prediction 463 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02621 Phac-Chr9 24730677 24736703 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02621 273 328 Homeobox Transcription Factor Family AT1G28420 44.643 2.85e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Phac9g02621 WAC_Acf1_DNA_bd 2.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02621 - - gmx:100784607 959.133