Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02592 ATGGAAGATGCAAGTTTCAACCTTCCTCCTGGGTTTTTCTTCTCTCCAACTGATGAAGAACTCGTTCTTCACTTTCTCTATTGCAAGGCTTCTCTTATTCCATGTCATCCCAACATAATCCCAGACCTCGATTTCTCTCGGCTTCATCCTTGGGAACTAAATGGTAAGGCTTTGTTAAGTGGGAATCAGTACTATTTCTTTACCAAAGTGAATGAAAACAGAACAATGGAAAATGGGTGTTGGAAGGAAATAGGTGTCACTGAACCTATATTTTCAACTTTTGACAAGAAAGTGGGAACGAAGAAATACTTGGTATTCCACATTGGTGAAGAAGCTCCACATGGTACTGAAACCAATTGGGTAATGCAAGAATATCATATATGTTCCTCTGGGTTTGACACTGCGTCCTATAGAAGTTCTAGGAGAAGAAGAAAACATGTAAGTGACTTTGTTTTATTCATTTTGTTAAGCTAA 474 0.384 MEDASFNLPPGFFFSPTDEELVLHFLYCKASLIPCHPNIIPDLDFSRLHPWELNGKALLSGNQYYFFTKVNENRTMENGCWKEIGVTEPIFSTFDKKVGTKKYLVFHIGEEAPHGTETNWVMQEYHICSSGFDTASYRSSRRRRKHVSDFVLFILLS* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02592 157 Pfam No apical meristem (NAM) protein 9 127 IPR003441 GO:0003677|GO:0006355
Phac9g02592 157 Gene3D NAC domain 17 155 IPR036093 GO:0003677|GO:0006355
Phac9g02592 157 PANTHER NAC TRANSCRIPTION FACTOR 56 8 142 - -
Phac9g02592 157 SUPERFAMILY NAC domain 5 132 IPR036093 GO:0003677|GO:0006355
Phac9g02592 157 ProSiteProfiles NAC domain profile. 8 145 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02592 Phac-Chr9 24534026 24535264 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02592 7 152 NAC Transcription Factor Family AT1G61110 39.241 2.74e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac9g02592 NAM 4.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02592 - - gmx:100170711 270.011