Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02590 ATGCATATGTTTATACTTTATACAGGTAAGGCTTTGTTAAGTGGGAATCAGTACTATTTCTTTACCAAAGTGAATGAAAACAGAACAATGGAAAATGGGTGTTGGAAGGAAATAGGTGTCACTGAACCTATATTTTCAACTTTTGACAAGAAAGTGGGAACGAAGAAATACTTGGTATTCCACATTGGTGAAGAAGCTCCACATGGTACTGAAACCAATTGGGTAATGCAAGAATATCATATATGTTCCTCTGGGTTTGACACTGCGTCCTATAGAAGTTCTAGGAGAAGAAGAAAACATGATCAAAGTTGGAGCAAGTGGGTTTTGTGCAGAGTTTACGAGAAGATGAGGTCTGAACAAGGTGTAAACTGCTATAGCGATGATGACGATGAGAGTGGATCAGAGCTTTCATGGCTAGATGAAGTTTATCTGTCCTTGGATGATGATCTGGAAGAAATTGGCATGCCTAATTAG 474 0.3861 MHMFILYTGKALLSGNQYYFFTKVNENRTMENGCWKEIGVTEPIFSTFDKKVGTKKYLVFHIGEEAPHGTETNWVMQEYHICSSGFDTASYRSSRRRRKHDQSWSKWVLCRVYEKMRSEQGVNCYSDDDDESGSELSWLDEVYLSLDDDLEEIGMPN* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02590 157 PANTHER NAC TRANSCRIPTION FACTOR 56 15 122 - -
Phac9g02590 157 SUPERFAMILY NAC domain 9 114 IPR036093 GO:0003677|GO:0006355
Phac9g02590 157 ProSiteProfiles NAC domain profile. 1 115 IPR003441 GO:0003677|GO:0006355
Phac9g02590 157 Gene3D NAC domain 6 119 IPR036093 GO:0003677|GO:0006355
Phac9g02590 157 Pfam No apical meristem (NAM) protein 13 81 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02590 Phac-Chr9 24534026 24535264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02590 10 120 NAC Transcription Factor Family AT1G61110 35.833 4.08e-18 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac9g02590 NAM 2.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02590 - - gmx:100170711 266.544