Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02583 ATGGAAGATGAAAGCCACACCAATCTCCCAAATGCCTTCATCACAGGAAGCCCTGAAAGCCCTTCCTTAAAGCCATCCAATAACACCACCACCACTAACCATCACAACAACAACAAAGAACAAGATCGCTTTCTCCCTATCGCCAACGTCGGAAGAATAATGAAAAAGGCCATCCCTGGCAATGGAAAAATCTCAAAGGATGCAAAAGAAACAGTTCAAGAGTGTGTCTCTGAGTTCATCAGCTTTGTCACAGGCGAAGCCTCAGACAAATGCCAAAGGGAAAAGAGAAAGACCATCAATGGAGATGACATCATTTGGGCCATCACAACCCTAGGATTTGAGGACTATGTGGACCCTCTAAAATCCTATCTCCAAAAATATAAAGAGATTGAAGGAGAGAAGCTTAACATTCCTAAGCAACAACGTTCTGAACAAAGGCTACATCATCAACACCAAAATCCCCACCAAGACCAAAATAATAACAATCTAAGTAGTAGTGTATATTCCTCTCCAACTCTTATTTCTCAGCCATCTTACGTTCCCACGGATCAACTATTTTCCCTACCATTCTCCCCAAATTCCCTTCAGAAACAGTTACAGCCGCAAGACCAGATCGATTCTGTGGGGCAATGGTAA 636 0.4277 MEDESHTNLPNAFITGSPESPSLKPSNNTTTTNHHNNNKEQDRFLPIANVGRIMKKAIPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVDPLKSYLQKYKEIEGEKLNIPKQQRSEQRLHHQHQNPHQDQNNNNLSSSVYSSPTLISQPSYVPTDQLFSLPFSPNSLQKQLQPQDQIDSVGQW* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02583 211 MobiDBLite consensus disorder prediction 134 153 - -
Phac9g02583 211 MobiDBLite consensus disorder prediction 154 168 - -
Phac9g02583 211 Gene3D Histone, subunit A 31 166 IPR009072 GO:0046982
Phac9g02583 211 MobiDBLite consensus disorder prediction 1 42 - -
Phac9g02583 211 MobiDBLite consensus disorder prediction 8 35 - -
Phac9g02583 211 PRINTS CCAAT-binding transcription factor subunit A signature 110 128 - -
Phac9g02583 211 PRINTS CCAAT-binding transcription factor subunit A signature 72 90 - -
Phac9g02583 211 PRINTS CCAAT-binding transcription factor subunit A signature 91 109 - -
Phac9g02583 211 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 44 108 IPR003958 -
Phac9g02583 211 SUPERFAMILY Histone-fold 41 160 IPR009072 GO:0046982
Phac9g02583 211 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 26 166 IPR027113 GO:0001228|GO:0006355|GO:0016602
Phac9g02583 211 MobiDBLite consensus disorder prediction 134 168 - -
Phac9g02583 211 FunFam Nuclear transcription factor Y subunit B-3 33 159 - -
Phac9g02583 211 ProSitePatterns NF-YB/HAP3 subunit signature. 75 91 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02583 Phac-Chr9 24472219 24473021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02583 16 208 CCAAT-HAP3 Transcription Factor Family AT2G13570 65.534 3.89e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Phac9g02583 CBFD_NFYB_HMF 6.2e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02583 K08065 - gmx:100778216 310.071