Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02545 ATGAAGGGTGAATTAGAGTTGCCACCTGGGTTCAGGTTTCACCCCACGGATGATGAAATGGTGAACCATTATCTGTGTAGGAAGTGCGCTGGTCAACCAATTGCTGTTCCTATCATCAAAGAGATCGATTTGTACAAGTTTGATCCATGGCAGCTTCCAGAAATGGGATTTTACGGCGAGAAAGAATGGTACTTCTTTTCTCCTCGGGACCGCAAATACCCCAACGGCTCACGGCCGAATCGCGCCGCCGGAAGTGGGTATTGGAAAGCCACCGGCGCCGATAAACCGATCGGTAAGCCGAAGGCGCTCGGGATCAAGAAAGCTCTGGTATTTTACTCGGGAAAAGCTCCGAAAGGGGAGAAAACCAATTGGATCATGCACGAATATCGCCTCGCCAATGTTGACCGATCAGCCTCCAAGAAAAACAACAACCTAAGGCTTGACGATTGGGTGTTGTGTCGAATTTACAACAAGAAAGGGAAGATTGAGAAATACAACACGGGGGCACAGAAAATGGAGACTGGGGTGGTTGAAAATTTCGATCAGGAGATGAAGCCTGAGATTGAAAAGCTTAGGAATGAGCAATTGTTTATGGAGAGTTCAGAGTCGATGCATAGAGTGCAGACTGAGTCGAGCGGTTCAGAGCAGGTGGTTTCGGCGGACGTGAGGTGGGAGAGGGAAGTGCAGAGCCACCCCAAATGGAATGACATTGGGCTACAGCTTGAAAACGCCTTTGATTTTGAATACAATTACTTTGACAATAATAACCTTTCGGTGGATGACCCTTTTGGGAATGTTGAGTACCCAATAGGCCACGTGTCTCCCTTGCAGGACATTCTCATGGAAGCCCTATTGATGTGA 861 0.4797 MKGELELPPGFRFHPTDDEMVNHYLCRKCAGQPIAVPIIKEIDLYKFDPWQLPEMGFYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYSGKAPKGEKTNWIMHEYRLANVDRSASKKNNNLRLDDWVLCRIYNKKGKIEKYNTGAQKMETGVVENFDQEMKPEIEKLRNEQLFMESSESMHRVQTESSGSEQVVSADVRWEREVQSHPKWNDIGLQLENAFDFEYNYFDNNNLSVDDPFGNVEYPIGHVSPLQDILMEALLM* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02545 286 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Phac9g02545 286 PANTHER NAC TRANSCRIPTION FACTOR 56 7 200 - -
Phac9g02545 286 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Phac9g02545 286 Gene3D NAC domain 16 163 IPR036093 GO:0003677|GO:0006355
Phac9g02545 286 FunFam NAC transcription factor 16 162 - -
Phac9g02545 286 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02545 Phac-Chr9 23956100 23958149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02545 1 281 NAC Transcription Factor Family AT1G01720 59.794 4.18e-115 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac9g02545 NAM 2.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02545 - - gmx:100814504 472.241