Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02505 ATGGAAAGAGCTAGCAGCAGCAACAGTGGTGAGAGTAAAAAGGGCTGCAGTAGAGGACATTGGAGACCCTCCGAAGATGAGACACTTAAGAAACTTGTGAAGCAATATGGTCCCCAAAACTGGAACTTTATTTCAGAACATCTAGAACGAAGATCAGGGAAAAGTTGTAGATTGAGATGGTACAATCAGCTAGACCCAAACATCATCAAAAAGCCATTCACCGAAGAGGATGAAGAAAGACTCCTAGCACTGCACAAAGTGAAGGGAAACAAATGGGCTGCAATAGCCAGATTCTTCCCTGGAAAAACTGACAATGCTGTCAAGAATCAGTTCCATGTATTAATGGCCAGAAGGAAGAGGGAGCGTTTGGCACTGTTTGGTGACACATTTGGTCATAATCCTCTAATTAATCTTAATAACATGCAAAACTACAAAAACAAGGGAATGTTTGGCACGTATGTCTCACAGAAACCAACTCCTTGGACTACATTGGGTGCATCTTCAACCATCACATCATGTTTTGGTATTTCTAGTGTGGTTCACAGAGACTCAAACGTGTCTTCAAGTGCTAGAGAGAAAGCATTGTTTGATTTGGACCATTTTTCTTGTCGTAGTCCTCCAACTGTTGGTTCTTCTATTCTTGGCAGTTACTACAGTTTCACTGCCCCAGGACTTCCTAGTGTTGGCAAGGTTGTTCCCCTTCCACACAAATTTTCAAACTATAGTTATGACCACAGACCTATGGACTCTAACAAAAGTTGCAAAACAATTAAACATGCACGTGATAGCTCCTCCACATTATGCAAGTTCAGTACCACTCTTGAGCCTCTTAATCTCAAGCAAAAGGGTGTTTCCTTCATAGACTTTCTCGGAGTGGGAAGTTCTCCTAATTATCGTCACAATTCACACCATAACGTGCCTTAA 924 0.4177 MERASSSNSGESKKGCSRGHWRPSEDETLKKLVKQYGPQNWNFISEHLERRSGKSCRLRWYNQLDPNIIKKPFTEEDEERLLALHKVKGNKWAAIARFFPGKTDNAVKNQFHVLMARRKRERLALFGDTFGHNPLINLNNMQNYKNKGMFGTYVSQKPTPWTTLGASSTITSCFGISSVVHRDSNVSSSAREKALFDLDHFSCRSPPTVGSSILGSYYSFTAPGLPSVGKVVPLPHKFSNYSYDHRPMDSNKSCKTIKHARDSSSTLCKFSTTLEPLNLKQKGVSFIDFLGVGSSPNYRHNSHHNVP* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02505 307 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Phac9g02505 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 68 IPR017930 -
Phac9g02505 307 SMART sant 17 66 IPR001005 -
Phac9g02505 307 SMART sant 69 117 IPR001005 -
Phac9g02505 307 CDD SANT 21 62 IPR001005 -
Phac9g02505 307 CDD SANT 72 115 IPR001005 -
Phac9g02505 307 Gene3D - 71 128 - -
Phac9g02505 307 ProSiteProfiles Myb-like domain profile. 13 64 IPR001005 -
Phac9g02505 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 119 IPR017930 -
Phac9g02505 307 Pfam Myb-like DNA-binding domain 21 81 - -
Phac9g02505 307 PANTHER MYB PROTEIN-RELATED 18 221 - -
Phac9g02505 307 MobiDBLite consensus disorder prediction 1 23 - -
Phac9g02505 307 Gene3D - 18 69 - -
Phac9g02505 307 FunFam MYB transcription factor 18 69 - -
Phac9g02505 307 SUPERFAMILY Homeodomain-like 17 111 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02505 Phac-Chr9 23685340 23686399 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02505 1 293 MYB Transcription Factor Family AT4G33450 41.914 2.92e-63 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac9g02505 Myb_DNA-bind_6 5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02505 K09422 - rcu:8263076 216.853