Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02502 ATGGAAATAGATCATGGATACATAAACAATGCGGAGCATGGTAAAGATGATGTTGGGGTGATGATAGTATTTGACAATGTGAACCAAGTGGTAGTGGAATTGAGCCAAGAAGCAGAGAGATACAATACAGAGTGTGTTGTTGTTGCTTCTTCGCCACAACTCAACAACATGGGTATCTCCAGAGATTCTATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCCTGGAGGAAGAAGAGAAAGTATGAGCTTGGTCGCCAGCCTGCTAACACTAAGCTGTCAAGCAACAAGACAGTCAGGAGGATTCGTGTTAGAGGTGGCAATGTTAAGTGGAGGGCACTTAGGTTGGATACTGGAAATTACTCCTGTGGAAGTGAAGCTGTAACTCGCAAGACGCGTATACTTGATGTGGTATACAATGCCTCAAACAATGAGCTTGTGCGTACTCAGACCCTTGTCAAAAGTGCTATTGTTCAGGTTGATGCCGCTCCATTCAAACAGTGGTATCTTCAGCACTATGGTGTAGACATTGGTAGGAAGAAGAAGACAGCTGCCAAGAAGGATTCTGCCGAGGAGGGTGACGCTGCAGCAGCAGAAGAAGCCAAAAAGAGTAACCATGTGCAAAGAAAACTGGAGAAGCGCCAGAAAGATCGCAAGCTTGATGCTCACATTGAGGAGCAGTTTGCCGGTGGGCGTTTGCTTGCTTGCATTTCCTCTCGCCCTGGTCAATGTGGCAGATGTGACGGCTACATTTTGGAAGGTAAAGAGTTGGAATTTTACATGAAGAAACTCCAGAAGAAGAAGGGGAAGGGCGCTGCCTGA 825 0.4679 MEIDHGYINNAEHGKDDVGVMIVFDNVNQVVVELSQEAERYNTECVVVASSPQLNNMGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSCGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTAAKKDSAEEGDAAAAEEAKKSNHVQRKLEKRQKDRKLDAHIEEQFAGGRLLACISSRPGQCGRCDGYILEGKELEFYMKKLQKKKGKGAA* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02502 274 PANTHER 40S RIBOSOMAL PROTEIN S8 57 271 IPR001047 GO:0003735|GO:0005840|GO:0006412
Phac9g02502 274 Gene3D Ribosomal protein S8e, subdomain 164 232 IPR042563 -
Phac9g02502 274 FunFam 40S ribosomal protein S8 165 232 - -
Phac9g02502 274 NCBIfam ribosomal protein eS8 57 255 IPR001047 GO:0003735|GO:0005840|GO:0006412
Phac9g02502 274 Pfam Ribosomal protein S8e 61 253 IPR022309 -
Phac9g02502 274 ProSitePatterns Ribosomal protein S8e signature. 67 86 IPR018283 GO:0003735|GO:0005840|GO:0006412
Phac9g02502 274 MobiDBLite consensus disorder prediction 187 219 - -
Phac9g02502 274 FunFam 40S ribosomal protein S8 88 217 - -
Phac9g02502 274 Coils Coil 24 44 - -
Phac9g02502 274 Gene3D - 82 269 - -
Phac9g02502 274 CDD Ribosomal_S8e_like 61 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02502 Phac-Chr9 23671469 23672442 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02502 57 262 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.466 2.50e-126 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02502 K02995 - gmx:100794937 365.155