Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02489 ATGGCCCGAAGAAATTCCACTCCAGGGTTTCGGTTCCGGCCCACTGACGTTGAGTTGATTGAGTTTTTTCTGAAGAGGAAGGTTCGGGGTAAGGATATTCCTGGCGGAGTAATTGCTGAGCTTGACTTGTACAAGTATGCTCCGTGGGATCTTCCAGATAAATCTGCCCTCCAGAGTGGGGATTTGGAGTGGTACTTCTTTTGTCCGAAGGGGAAGAAATATTCGACTGGAGGGAGGTTTAATCGGTCGACGGAGGCTGGGTACTGGAAGACTACTGGGAAGGACAGAGCGGTTGAACACAAAAATCGAGTTGTGGGGATGATTAAAACTCTGGTTTTTCACACCGGTAAAGCCCCTAAGGGAGATCGGACTGATTGGGTTATGCATGAATTCAGAGTTGATGACAAGGAGATGGTTGACGAAGGCAGTTCGCAGGACTCCTATGTAATTTGTAGGATATTCCGAAAGGAGGGTCCTGGTCCCAGGAATGGTGCACAATACGGTAAACCATATGATGAGAAAGAATGGGATACAGATGAGGAAATTGACTCTGTGCAATCTGAACATGTTGCTTCTATGTCGACACCTGTTCCTATACAACCCAGTGAAAGTCATATCTCTATTGCAAATGACATCAATCCCTCTACAACTGGATGTGCTGGATTGACCTCTGTATCATGTGCATCAAAATTGATGCCTTCCTGCTCAGCATATTGTGTGCCTTCTGACAATCAAATTGACTCTGTGTCATGTGTATCAGAATTGATGCCCTCTTGCTCAGCACTACCTTTTTCTCCAAACTGTGCATTTGATTCTGTATCAGGTCTATCAAAAGTGACACCCTCTTGTTCAGCAGTTCCTTTAACTCCAAACTATGATGTTGACTCTGTATCATGTGTATCAAAATTGATGCCCTCTTGCTCAGCATTTTCTTCTGCTCCAAACAGTGAAGTTGACTCTGTATCTGTATCAAAAATGCCTTCTTGCTTGCCACTTGCTTCAGCTCCAAACAATCTAGTTGACACTTTATCATCTGTATCAGAATTGATGCCCTCTTGCACGGCACCATCTCCAAACCATCAAGATGATGAGAACATTTTATCTTTGCTAGATTATTTCAAAGAAGATGATGACACAATGGCTGTGAATGAAAACAATGGAATTATGAAGGTTGATCCTGATCAGGCGAACAATGCTGAATGCGCACCATGTTTGGATCCAAATGTGATTTTTGAGAACCTAGGAGACCTTGACAGCTTGGTTGGATTGGGTGAAGGCAGTTTTTCCTGTGGCCAGAAAAACGGACTTTCTACAGGCGATATGTTTTATACAGGTGGTGATTATATGTTTGGGTCTTTGGAACCCCAAGACTTTTTGGAGTTGACGGACCTAGCGGGGCCACAGCCCTGGCAGAATGAGCATGGAAGTTCTGGCGAATATAAGTAA 1446 0.4405 MARRNSTPGFRFRPTDVELIEFFLKRKVRGKDIPGGVIAELDLYKYAPWDLPDKSALQSGDLEWYFFCPKGKKYSTGGRFNRSTEAGYWKTTGKDRAVEHKNRVVGMIKTLVFHTGKAPKGDRTDWVMHEFRVDDKEMVDEGSSQDSYVICRIFRKEGPGPRNGAQYGKPYDEKEWDTDEEIDSVQSEHVASMSTPVPIQPSESHISIANDINPSTTGCAGLTSVSCASKLMPSCSAYCVPSDNQIDSVSCVSELMPSCSALPFSPNCAFDSVSGLSKVTPSCSAVPLTPNYDVDSVSCVSKLMPSCSAFSSAPNSEVDSVSVSKMPSCLPLASAPNNLVDTLSSVSELMPSCTAPSPNHQDDENILSLLDYFKEDDDTMAVNENNGIMKVDPDQANNAECAPCLDPNVIFENLGDLDSLVGLGEGSFSCGQKNGLSTGDMFYTGGDYMFGSLEPQDFLELTDLAGPQPWQNEHGSSGEYK* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02489 481 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Phac9g02489 481 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Phac9g02489 481 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Phac9g02489 481 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 226 - -
Phac9g02489 481 FunFam Nac domain-containing protein 86 15 159 - -
Phac9g02489 481 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02489 Phac-Chr9 23587845 23593360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02489 1 241 NAC Transcription Factor Family AT5G64060 49.793 4.29e-81 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac9g02489 NAM 9e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02489 - - vun:114164401 786.563